Concepedia

Multimodal Single-cell Visualization

Multimodal Single-Cell Visualization is a computational framework that integrates and visually represents multiple types of single-cell data modalities—such as gene expression, chromatin accessibility, and protein abundance—within a unified spatial or low-dimensional representation to enable comparative and integrative analysis at the single-cell level.

10

Publications

421

Citations

165

Authors

67

Institutions

Publications per year

2017–2026

9

Parents

Publications

10

A generalization of t-SNE and UMAP to single-cell multimodal omics

Van Hoan, Stefan Canzar · Genome biology · 2021 · 105 citations · Full text

, , +16

Vitessce: integrative visualization of multimodal and spatially resolved single-cell data

Mark S. Keller, Ilan Gold, Chuck McCallum et al. · Nature Methods · 2024 · 62 citations · Full text

, , +14

A guide to the BRAIN Initiative Cell Census Network data ecosystem

Michael Hawrylycz, Maryann E. Martone, Giorgio A. Ascoli et al. · PLoS Biology · 2023 · 53 citations · Full text

, , +14

DGCyTOF: Deep learning with graphic cluster visualization to predict cell types of single cell mass cytometry data

Lijun Cheng, Pratik Karkhanis, Birkan Gökbağ et al. · PLoS Computational Biology · 2022 · 49 citations · Full text

, , +17

ICARUS, an interactive web server for single cell RNA-seq analysis

Andrew Jiang, Klaus Lehnert, Linya You et al. · Nucleic Acids Research · 2022 · 45 citations · Full text

, , +17

1–5 of 10

Authors

165

  1. IG
    Ilan Gold

    Broad Institute, United States

    2 publications · 101 citations

    2

    h-index

  2. MS
    Mark S. Keller

    Harvard University, United States

    2 publications · 101 citations

    2

    h-index

  3. PV
    Peter V. Kharchenko

    Harvard University, United States

    2 publications · 101 citations

    2

    h-index

  4. TM
    Trevor Manz

    Harvard University, United States

    2 publications · 101 citations

    2

    h-index

  5. NG
    Nils Gehlenborg

    Harvard University, United States

    2 publications · 101 citations

    2

    h-index

1–5 of 165

Institutions

67

  1. Broad Institute

    Cambridge, United States

    3 h-index

    7 publications

    366 citations

  2. Icahn School of Medicine at Mount Sinai

    New York, United States

    2 h-index

    3 publications

    119 citations

  3. Altos Labs

    San Francisco, United States

    2 h-index

    2 publications

    101 citations

  4. Harvard University

    Cambridge, United States

    2 h-index

    12 publications

    606 citations

  5. BioLegend (United States)

    San Diego, United States

    1 h-index

    3 publications

    60 citations

  6. McGovern Institute for Brain Research

    Cambridge, United States

    1 h-index

    2 publications

    106 citations

  7. Institut National des Sciences Appliquées de Toulouse

    Toulouse, France

    1 h-index

    1 publications

    20 citations

  8. MIND Research Institute

    Irvine, United States

    1 h-index

    1 publications

    53 citations

1–8 of 67

Venues

  1. NAR Genomics and Bioinformatics

    1 publications · 20 citations

    1

    h-index

  2. Cell Reports Methods

    1 publications · 13 citations

    1

    h-index

  3. Nucleic Acids Research

    1 publications · 45 citations

    1

    h-index

  4. The Analyst

    1 publications · 20 citations

    1

    h-index

  5. Cytometry Part B Clinical Cytometry

    1 publications · 15 citations

    1

    h-index

1–5