Concepedia

Interactive Single-cell Data Exploration

Interactive Single-Cell Data Exploration is a computational framework that enables real-time, user-guided visualization and analysis of single-cell genomic data to facilitate dynamic hypothesis generation and biological insight discovery.

65

Publications

5.4K

Citations

372

Authors

150

Institutions

Publications per year

2017–2026

55

Parents

Publications

65

Giotto: a toolbox for integrative analysis and visualization of spatial expression data

Ruben Dries, Qian Zhu, Rui Dong et al. · Genome biology · 2021 · 950 citations · Full text

, , +17

CellProfiler Analyst: data exploration and analysis software for complex image-based screens

Thouis R. Jones, In Han Kang, Douglas B. Wheeler et al. · BMC Bioinformatics · 2008 · 574 citations · Full text

, , +17

SPRING: a kinetic interface for visualizing high dimensional single-cell expression data

Caleb Weinreb, Samuel L. Wolock, Allon M. Klein · Bioinformatics · 2017 · 331 citations · Full text

, , +17

Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM

Huidong Chen, Luca Albergante, Jonathan Y. Hsu et al. · Nature Communications · 2019 · 329 citations · Full text

, , +17

ShinyCell: simple and sharable visualization of single-cell gene expression data

John F. Ouyang, Uma S. Kamaraj, Elaine Yiqun Cao et al. · Bioinformatics · 2021 · 284 citations

, , +13

1–5 of 65

Authors

372

  1. AE
    Anne E. Carpenter

    Broad Institute, United States

    5 publications · 789 citations

    5

    h-index

  2. BD
    Bart Deplancke

    École Polytechnique Fédérale de Lausanne, Switzerland

    3 publications · 184 citations

    3

    h-index

  3. VG
    Vincent Gardeux

    École Polytechnique Fédérale de Lausanne, Switzerland

    3 publications · 184 citations

    3

    h-index

  4. SS
    Shantanu Singh

    Broad Institute, United States

    3 publications · 191 citations

    3

    h-index

  5. TH
    Thomas Höllt

    Delft University of Technology, Netherlands

    3 publications · 299 citations

    3

    h-index

1–5 of 372

Institutions

150

  1. Broad Institute

    Cambridge, United States

    10 h-index

    44 publications

    6.2K citations

  2. Harvard University

    Cambridge, United States

    8 h-index

    35 publications

    11.1K citations

  3. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    5 h-index

    14 publications

    1.1K citations

  4. Massachusetts Institute of Technology

    Cambridge, United States

    5 h-index

    12 publications

    2.3K citations

  5. Leiden University Medical Center

    Leiden, The Netherlands

    3 h-index

    16 publications

    1.5K citations

  6. École Polytechnique Fédérale de Lausanne

    Lausanne, Switzerland

    3 h-index

    14 publications

    892 citations

  7. Chinese Academy of Medical Sciences & Peking Union Medical College

    Beijing, China

    3 h-index

    16 publications

    434 citations

  8. University of Tübingen

    Tübingen, Germany

    3 h-index

    6 publications

    255 citations

1–8 of 150

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 16 publications · 410 citations

    12

    h-index

  2. Bioinformatics

    10 publications · 1.5K citations

    10

    h-index

  3. Nucleic Acids Research

    7 publications · 476 citations

    7

    h-index

  4. Nature Communications

    3 publications · 615 citations

    3

    h-index

  5. Genome biology

    3 publications · 1K citations

    3

    h-index

1–5