Shantanu Singh

CellProfiler 3.0: Next-generation image processing for biology

Claire McQuin, Allen Goodman, Vasiliy S. Chernyshev et al. · PLoS Biology · 2018 · 2.1K citations · Full text

Convolutional Neural Network, Engineering, Machine Learning +21

Nucleus segmentation across imaging experiments: the 2018 Data Science Bowl

Juan C. Caicedo, Allen Goodman, Kyle W. Karhohs et al. · Nature Methods · 2019 · 813 citations · Full text

Data-analysis strategies for image-based cell profiling

Juan Carlos Caicedo, Sam Cooper, Florian Heigwer et al. · Nature Methods · 2017 · 747 citations · Full text

Engineering, Microscopy, Biometrics +17

Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images

Juan C. Caicedo, Jonathan Roth, Allen Goodman et al. · Cytometry Part A · 2019 · 320 citations · Full text

Convolutional Neural Network, Medical Image Segmentation, Engineering +20

Repurposing High-Throughput Image Assays Enables Biological Activity Prediction for Drug Discovery

Jaak Simm, Günter Klambauer, Ádám Arany et al. · Cell chemical biology · 2018 · 247 citations · Full text

Drug Target, Engineering, Hit Identification +11