Concepedia

Shotgun Sequencing

Shotgun Sequencing is a genome sequencing method that randomly fragments genomic DNA into smaller pieces, sequences them in parallel, and computationally reassembles the complete sequence based on overlapping regions, distinguishing it from ordered, map-based sequencing approaches.

1.1K

Publications

129.5K

Citations

8.2K

Authors

2.1K

Institutions

Publications per year

2017–2026

588

Variants

Shotgun Dna Sequencing

Parents

Publications

1.1K

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

James J. Kozich, Sarah L. Westcott, Nielson T. Baxter et al. · Applied and Environmental Microbiology · 2013 · 7.5K citations · Full text

, , +15

Environmental Genome Shotgun Sequencing of the Sargasso Sea

J. Craig Venter, Karin Remington, John F. Heidelberg et al. · Science · 2004 · 4.4K citations

, , +17

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

Susannah J. Salter, Michael J. Cox, Elena M. Turek et al. · BMC Biology · 2014 · 3.5K citations · Full text

, , +17

<i>Consed:</i> A Graphical Tool for Sequence Finishing

David Gordon, Chris Abajian, Phil Green · Genome Research · 1998 · 3.3K citations · Full text

, , +17

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Heng Li, Jue Ruan, Richard Durbin · Genome Research · 2008 · 2.7K citations · Full text

, , +17

1–5 of 1.1K

Authors

8.2K

  1. PD
    Paul D. Cotter

    Teagasc - The Irish Agriculture and Food Development Authority, Ireland

    13 publications · 932 citations

    12

    h-index

  2. RK
    Rob Knight

    University of California San Diego, United States

    12 publications · 1.8K citations

    12

    h-index

  3. GA
    Gabriele Andrea Lugli

    University of Parma, Italy

    10 publications · 681 citations

    10

    h-index

  4. MV
    Marco Ventura

    University of Parma, Italy

    10 publications · 681 citations

    10

    h-index

  5. LM
    Leonardo Mancabelli

    University of Parma, Italy

    9 publications · 666 citations

    9

    h-index

1–5 of 8.2K

Institutions

2.1K

  1. University of Copenhagen

    Copenhagen, Denmark

    26 h-index

    103 publications

    14.7K citations

  2. University of California San Diego

    San Diego, United States

    24 h-index

    126 publications

    24.7K citations

  3. Centre National de la Recherche Scientifique

    Paris, France

    23 h-index

    104 publications

    21.4K citations

  4. University of Minnesota

    Minneapolis, United States

    22 h-index

    75 publications

    19.6K citations

  5. Chinese Academy of Sciences

    Beijing, China

    21 h-index

    130 publications

    9.8K citations

  6. University of Washington

    Seattle, United States

    21 h-index

    101 publications

    23.4K citations

  7. BGI Group (China)

    Shenzhen, China

    20 h-index

    152 publications

    33.6K citations

  8. University of California, Davis

    Davis, United States

    19 h-index

    66 publications

    20.4K citations

1–8 of 2.1K

Venues

  1. PLoS ONE

    65 publications · 6.2K citations

    40

    h-index

  2. Scientific Reports

    44 publications · 4K citations

    30

    h-index

  3. Genome Research

    GR · 31 publications · 9.3K citations

    29

    h-index

  4. BMC Genomics

    40 publications · 3K citations

    28

    h-index

  5. Frontiers in Microbiology

    42 publications · 3K citations

    24

    h-index

1–5