Concepedia

Self-supervised Protein Representation Learning

Self-Supervised Protein Representation Learning is a computational framework that belongs to the class of unsupervised learning methods, specifically distinguished by its ability to extract meaningful amino acid sequence representations through pretext tasks designed on unlabeled protein data without external annotation.

40

Publications

6K

Citations

175

Authors

76

Institutions

Publications per year

2017–2026

38

Parents

Publications

40

ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning

Ahmed Elnaggar, Michael Heinzinger, Christian Dallago et al. · IEEE Transactions on Pattern Analysis and Machine Intelligence · 2021 · 2.3K citations · Full text

, , +15

ProteinBERT: a universal deep-learning model of protein sequence and function

Nadav Brandes, Dan Ofer, Yam Peleg et al. · Bioinformatics · 2022 · 975 citations · Full text

, , +13

Evaluating Protein Transfer Learning with TAPE

Roshan Rao, Nicholas Bhattacharya, Neil Thomas et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2019 · 689 citations · Full text

, , +16

ProtTrans: Towards Cracking the Language of Life’s Code Through Self-Supervised Learning

bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 365 citations · Full text

, , +10

UDSMProt: universal deep sequence models for protein classification

Nils Strodthoff, Patrick Wagner, Markus Wenzel et al. · Bioinformatics · 2020 · 211 citations · Full text

, , +16

1–5 of 40

Authors

175

  1. KY
    Kevin Yang

    Microsoft (United States), United States

    2 publications · 114 citations

    2

    h-index

  2. JH
    James H. R. Farmery

    University of Oxford, United Kingdom

    2 publications · 176 citations

    2

    h-index

  3. RY
    Ronghui You

    Fudan University, China

    2 publications · 106 citations

    2

    h-index

  4. XC
    Xi Chen

    Shandong Institute of Automation, China

    2 publications · 769 citations

    2

    h-index

  5. YL
    Yunjia Liu

    The University of Queensland, Australia

    2 publications · 106 citations

    2

    h-index

1–5 of 175

Institutions

76

  1. Google (United States)

    Mountain View, United States

    4 h-index

    4 publications

    3.4K citations

  2. Baidu (China)

    Beijing, China

    3 h-index

    18 publications

    392 citations

  3. Fudan University

    Shanghai, China

    3 h-index

    15 publications

    550 citations

  4. Berkeley College

    New York, United States

    2 h-index

    14 publications

    6K citations

  5. Oak Ridge National Laboratory

    Oak Ridge, United States

    2 h-index

    2 publications

    2.6K citations

  6. Shanghai Innovative Research Center of Traditional Chinese Medicine

    Shanghai, China

    2 h-index

    2 publications

    106 citations

  7. Nvidia (United States)

    Santa Clara, United States

    2 h-index

    6 publications

    7.9K citations

  8. University of Chicago

    Chicago, United States

    2 h-index

    2 publications

    114 citations

1–8 of 76

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 8 publications · 1.3K citations

    8

    h-index

  2. Bioinformatics

    6 publications · 1.3K citations

    6

    h-index

  3. Briefings in Bioinformatics

    3 publications · 99 citations

    3

    h-index

  4. arXiv (Cornell University)

    Repository · 3 publications · 81 citations

    3

    h-index

  5. Protein Science

    PS · 2 publications · 46 citations

    2

    h-index

1–5