Concepedia

Optical Mapping Scaffolding

Optical Mapping Scaffolding is a genomic assembly technique that belongs to the class of physical mapping-based scaffolding methods, distinguished by its reliance on high-resolution restriction maps generated from single DNA molecules to order and orient sequence contigs with high accuracy.

24

Publications

2.5K

Citations

175

Authors

78

Institutions

Publications per year

2017–2026

12

Parents

Publications

24

Optical maps refine the bread wheat <i>Triticum aestivum</i> cv. Chinese Spring genome assembly

Tingting Zhu, Le Wang, Hélène Rimbert et al. · The Plant Journal · 2021 · 587 citations · Full text

, , +14

The genome of Prunus mume

Qixiang Zhang, Wenbin Chen, Lidan Sun et al. · Nature Communications · 2012 · 480 citations · Full text

, , +17

Scaffolding and validation of bacterial genome assemblies using optical restriction maps

Niranjan Nagarajan, Timothy D. Read, Mihai Pop · Bioinformatics · 2008 · 158 citations · Full text

, , +14

Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data

Wen‐Biao Jiao, Gonzalo Garcia Accinelli, Benjamin Hartwig et al. · Genome Research · 2017 · 155 citations · Full text

, , +17

A Single Molecule Scaffold for the Maize Genome

Shiguo Zhou, Fusheng Wei, John D. Nguyen et al. · PLoS Genetics · 2009 · 137 citations · Full text

, , +17

1–5 of 24

Authors

175

  1. DC
    David C. Schwartz

    University of Wisconsin–Madison, United States

    5 publications · 372 citations

    5

    h-index

  2. DF
    Dan Forrest

    University of Wisconsin–Madison, United States

    3 publications · 273 citations

    3

    h-index

  3. CC
    Chris Churas

    University of Wisconsin–Madison, United States

    3 publications · 273 citations

    3

    h-index

  4. SZ
    Shiguo Zhou

    University of Wisconsin–Madison, United States

    3 publications · 273 citations

    3

    h-index

  5. AL
    Alex Lim

    Iowa State University, United States

    3 publications · 222 citations

    3

    h-index

1–5 of 175

Institutions

78

  1. University of Wisconsin–Madison

    Madison, United States

    5 h-index

    48 publications

    4K citations

  2. University of California, Davis

    Davis, United States

    3 h-index

    14 publications

    4.4K citations

  3. New York University

    New York, United States

    2 h-index

    6 publications

    499 citations

  4. Genoscope

    Évry-Courcouronnes, France

    2 h-index

    10 publications

    219 citations

  5. Agricultural Research Service

    Washington, United States

    2 h-index

    3 publications

    861 citations

  6. Centre National de la Recherche Scientifique

    Paris, France

    2 h-index

    8 publications

    177 citations

  7. University of Arizona

    Tucson, United States

    2 h-index

    3 publications

    364 citations

  8. Université Paris-Saclay

    Gif-sur-Yvette, France

    2 h-index

    10 publications

    219 citations

1–8 of 78

Venues

  1. Bioinformatics

    3 publications · 240 citations

    3

    h-index

  2. G3 Genes Genomes Genetics

    2 publications · 200 citations

    2

    h-index

  3. GigaScience

    2 publications · 80 citations

    2

    h-index

  4. Genome Research

    GR · 2 publications · 241 citations

    2

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 29 citations

    2

    h-index

1–5