Concepedia

Network-based Enrichment Analysis

Network-Based Enrichment Analysis is a computational method that integrates biological network topology with functional annotation data to identify significantly overrepresented functions or pathways within a set of genes or proteins, distinguishing itself from traditional enrichment approaches by explicitly considering molecular interactions and connectivity patterns.

118

Publications

35.6K

Citations

620

Authors

275

Institutions

Publications per year

2017–2026

58

Parents

Publications

118

STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets

Damian Szklarczyk, Annika L. Gable, David Lyon et al. · Nucleic Acids Research · 2018 · 19.2K citations · Full text

, , +17

ShinyGO: a graphical gene-set enrichment tool for animals and plants

Xijin Ge, Dongmin Jung, Runan Yao · Bioinformatics · 2019 · 5.3K citations · Full text

, , +17

Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation

Daniele Merico, Ruth Isserlin, Oliver Stueker et al. · PLoS ONE · 2010 · 2.4K citations · Full text

, , +11

FunRich: An open access standalone functional enrichment and interaction network analysis tool

Mohashin Pathan, Shivakumar Keerthikumar, Ching‐Seng Ang et al. · PROTEOMICS · 2015 · 1.4K citations

, , +17

pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks

Ege Ülgen, Osman Uğur Sezerman · Frontiers in Genetics · 2019 · 500 citations · Full text

, , +12

1–5 of 118

Authors

620

  1. AA
    Andrey Alexeyenko

    Karolinska Institutet, Sweden

    6 publications · 294 citations

    6

    h-index

  2. RI
    Ruth Isserlin

    University of Toronto, Canada

    6 publications · 3.1K citations

    6

    h-index

  3. AR
    Alexander R. Pico

    Gladstone Institutes, United States

    6 publications · 910 citations

    6

    h-index

  4. BD
    Barry Demchak

    University of California San Diego, United States

    4 publications · 515 citations

    4

    h-index

  5. JB
    Jan Baumbach

    University of Southern Denmark, Denmark

    4 publications · 148 citations

    4

    h-index

1–5 of 620

Institutions

275

  1. Science for Life Laboratory

    Stockholm, Sweden

    7 h-index

    19 publications

    952 citations

  2. Karolinska Institutet

    Stockholm, Sweden

    7 h-index

    23 publications

    1K citations

  3. University of Toronto

    Toronto, Canada

    6 h-index

    16 publications

    13.7K citations

  4. Gladstone Institutes

    San Francisco, United States

    6 h-index

    11 publications

    1K citations

  5. University of British Columbia

    Vancouver, Canada

    5 h-index

    5 publications

    591 citations

  6. University of Southern Denmark

    Odense, Denmark

    4 h-index

    26 publications

    943 citations

  7. University of California San Diego

    San Diego, United States

    4 h-index

    4 publications

    515 citations

  8. Yonsei University

    Seoul, South Korea

    4 h-index

    8 publications

    5.6K citations

1–8 of 275

Venues

  1. Bioinformatics

    20 publications · 6.5K citations

    16

    h-index

  2. BMC Bioinformatics

    15 publications · 1.2K citations

    15

    h-index

  3. Nucleic Acids Research

    14 publications · 20.8K citations

    14

    h-index

  4. PLoS ONE

    7 publications · 2.7K citations

    7

    h-index

  5. F1000Research

    5 publications · 685 citations

    5

    h-index

1–5