Concepedia

Multiple Sequence Alignment Features

Multiple Sequence Alignment Features is a computational representation derived from the evolutionary conservation and co-variation patterns in a multiple sequence alignment, serving as input to predictive models in contact map and residue-residue distance prediction to infer spatial proximity between amino acid residues in protein structures.

80

Publications

107.6K

Citations

354

Authors

183

Institutions

Publications per year

2017–2026

30

Parents

Publications

80

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh, Daron M. Standley · Molecular Biology and Evolution · 2013 · 48.3K citations · Full text

, , +11

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

Julie Thompson · Nucleic Acids Research · 1997 · 39.2K citations · Full text

, , +13

WebLogo: A Sequence Logo Generator: Figure 1

Gavin E. Crooks, Gary C. Hon, John‐Marc Chandonia et al. · Genome Research · 2004 · 13K citations · Full text

, , +15

CLUSTAL V: improved software for multiple sequence alignment

Desmond G. Higgins, Alan J. Bleasby, Rainer Fuchs · Computer applications in the biosciences · 1992 · 2.4K citations · Full text

, , +12

MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins

David T. Jones, Tanya Singh, Tomasz Kościółek et al. · Bioinformatics · 2014 · 383 citations · Full text

, , +14

1–5 of 80

Authors

354

  1. JP
    Javier Pérez-Florido

    Fundación Progreso y Salud, Spain

    3 publications · 92 citations

    3

    h-index

  2. OP
    Olivier Poch

    Centre National de la Recherche Scientifique, France

    3 publications · 372 citations

    3

    h-index

  3. JU
    José Urquiza

    Universitat Pompeu Fabra, Spain

    3 publications · 92 citations

    3

    h-index

  4. HP
    H. Pomares

    Universidad de Granada, Spain

    3 publications · 92 citations

    3

    h-index

  5. JT
    Julie Thompson

    Centre National de la Recherche Scientifique, France

    3 publications · 39.5K citations

    3

    h-index

1–5 of 354

Institutions

183

  1. Chinese Academy of Sciences

    Beijing, China

    4 h-index

    11 publications

    448 citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    4 h-index

    17 publications

    1.7K citations

  3. Institut d'Investigació Biomédica de Bellvitge

    Barcelona, Spain

    3 h-index

    18 publications

    831 citations

  4. University of Washington

    Seattle, United States

    3 h-index

    6 publications

    511 citations

  5. Universidad de Granada

    Granada, Spain

    3 h-index

    20 publications

    629 citations

  6. University of Chinese Academy of Sciences

    Beijing, China

    3 h-index

    11 publications

    552 citations

  7. Institut de génétique et de biologie moléculaire et cellulaire

    Illkirch-Graffenstaden, France

    3 h-index

    10 publications

    1.4K citations

  8. University of California, Berkeley

    Berkeley, United States

    2 h-index

    4 publications

    39.1K citations

1–8 of 183

Venues

  1. Bioinformatics

    9 publications · 806 citations

    9

    h-index

  2. PLoS ONE

    6 publications · 493 citations

    6

    h-index

  3. Nucleic Acids Research

    5 publications · 39.7K citations

    5

    h-index

  4. Proceedings of the National Academy of Sciences

    PNAS · 4 publications · 184 citations

    4

    h-index

  5. Proteins Structure Function and Bioinformatics

    3 publications · 100 citations

    3

    h-index

1–5