Concepedia

Multi-sample Binning

Multi-Sample Binning is a metagenome binning strategy that belongs to the class of binning methods and is distinguished by its integration of abundance and compositional information across multiple samples to improve the recovery of microbial genomes from complex communities.

4

Publications

1.4K

Citations

21

Authors

14

Institutions

Publications per year

2017–2026

2

Parents

Publications

4

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

Mads Albertsen, Philip Hugenholtz, Adam Skarshewski et al. · Nature Biotechnology · 2013 · 1.3K citations

, , +16

Binning microbial genomes using deep learning

Jakob Nybo Nissen, Casper Kaae Sønderby, José Juan Almagro Armenteros et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2018 · 29 citations · Full text

, , +15

Benchmarking metagenomic binning tools on real datasets across sequencing platforms and binning modes

Haitao Han, Ziye Wang, Shanfeng Zhu · Nature Communications · 2025 · 23 citations · Full text

, , +17

MetaGen: reference-free learning with multiple metagenomic samples

Xin Xing, Jun S. Liu, Wenxuan Zhong · Genome biology · 2017 · 21 citations · Full text

, , +15

PhyloPythiaS+: A self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes

Ivan Gregor, Johannes Dröge, Melanie Schirmer et al. · arXiv (Cornell University) · 2014 · 17 citations · Full text

, , +17

1–5 of 4

Authors

21

  1. CK
    Casper Kaae Sønderby

    University of Copenhagen, Denmark

    1 publications · 29 citations

    1

    h-index

  2. IG
    Ivan Gregor

    Heinrich Heine University Düsseldorf, Germany

    1 publications · 17 citations

    1

    h-index

  3. XX
    Xin Xing

    Harvard University, United States

    1 publications · 21 citations

    1

    h-index

  4. TN
    Thomas Nordahl Petersen

    Technical University of Denmark, Denmark

    1 publications · 29 citations

    1

    h-index

  5. PH
    Philip Hugenholtz

    The University of Queensland, Australia

    1 publications · 1.3K citations

    1

    h-index

1–5 of 21

Institutions

14

  1. University of Glasgow

    Glasgow, United Kingdom

    1 h-index

    1 publications

    17 citations

  2. Novo Nordisk Foundation

    Copenhagen, Denmark

    1 h-index

    1 publications

    29 citations

  3. Aalborg University

    Aalborg, Denmark

    1 h-index

    3 publications

    4K citations

  4. Heinrich Heine University Düsseldorf

    Düsseldorf, Germany

    1 h-index

    2 publications

    34 citations

  5. Broad Institute

    Cambridge, United States

    1 h-index

    1 publications

    17 citations

  6. Max Planck Institute for Informatics

    Saarbrücken, Germany

    1 h-index

    2 publications

    34 citations

  7. Clinical Microbiomics (Denmark)

    Copenhagen, Denmark

    1 h-index

    1 publications

    29 citations

  8. Technical University of Denmark

    Kongens Lyngby, Denmark

    1 h-index

    6 publications

    174 citations

1–8 of 14

Venues

  1. Nature Biotechnology

    1 publications · 1.3K citations

    1

    h-index

  2. arXiv (Cornell University)

    Repository · 1 publications · 17 citations

    1

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 29 citations

    1

    h-index

  4. Genome biology

    1 publications · 21 citations

    1

    h-index

  5. Nature Communications

    1 publications · 23 citations

1–5