Contig Classification is a computational method in metagenomics that assigns taxonomic or functional labels to contiguous sequences (contigs) reconstructed from shotgun metagenomic sequencing data based on homology, composition, or machine learning approaches.
20
Publications
1.6K
Citations
70
Authors
35
Institutions
Publications per year
2017–2026
16
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20
Contigs Built with Fingerprints, Markers, and FPC V4.7
Carol Soderlund · Genome Research · 2000 · 323 citations · Full text
Fast and sensitive taxonomic assignment to metagenomic contigs
Milot Mirdita, Martin Steinegger, Florian P. Breitwieser et al. · Bioinformatics · 2021 · 314 citations · Full text
ViraMiner: Deep learning on raw DNA sequences for identifying viral genomes in human samples
Ardi Tampuu, Zurab Bzhalava, Joakim Dillner et al. · PLoS ONE · 2019 · 124 citations · Full text
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Authors
70
- RV
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- TD
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- RJ
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- AT
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- ZB
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1–5 of 70
Institutions
35
Wellcome Sanger Institute
Cambridge, United Kingdom
3 h-index
3 publications
545 citations
Johns Hopkins University
Baltimore, United States
2 h-index
2 publications
337 citations
Seoul National University
Seoul, South Korea
2 h-index
2 publications
337 citations
Karolinska Institutet
Stockholm, Sweden
2 h-index
4 publications
302 citations
Karolinska University Hospital
Stockholm, Sweden
2 h-index
2 publications
151 citations
University of Helsinki
Helsinki, Finland
2 h-index
2 publications
222 citations
Statistics Finland
Helsinki, Finland
2 h-index
2 publications
222 citations
University of Tartu
Tartu, Estonia
2 h-index
4 publications
302 citations
1–8 of 35
Venues
- Bioinformatics
4 publications · 519 citations
4
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- bioRxiv (Cold Spring Harbor Laboratory)
Repository · 4 publications · 117 citations
4
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- BMC Bioinformatics
3 publications · 83 citations
3
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- Nucleic Acids Research
2 publications · 88 citations
2
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- Microbial Genomics
MGen · 1 publications · 192 citations
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