Concepedia

Batch Correction Metrics

Batch Correction Metrics is a quantitative evaluation framework used in bioinformatics to assess the effectiveness of batch effect removal by measuring the degree of technical variation reduction while preserving biological signal integrity across datasets.

14

Publications

1.2K

Citations

61

Authors

25

Institutions

Publications per year

2017–2026

9

Parents

Publications

14

Removing Batch Effects in Analysis of Expression Microarray Data: An Evaluation of Six Batch Adjustment Methods

Chao Chen, Kay Grennan, Judith A. Badner et al. · PLoS ONE · 2011 · 592 citations · Full text

, , +15

Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes

Holger Weishaupt, Patrik Johansson, Anders Sundström et al. · Bioinformatics · 2019 · 78 citations · Full text

, , +17

Identifying and mitigating batch effects in whole genome sequencing data

Jennifer Tom, Jens Reeder, William F. Forrest et al. · BMC Bioinformatics · 2017 · 68 citations · Full text

, , +17

Evaluating batch correction methods for image-based cell profiling

John Arévalo, Ellen Su, Jessica Ewald et al. · Nature Communications · 2024 · 67 citations · Full text

, , +10

A Novel Statistical Method to Diagnose, Quantify and Correct Batch Effects in Genomic Studies

Gift Nyamundanda, Pawan Poudel, Yatish Patil et al. · Scientific Reports · 2017 · 59 citations · Full text

, , +14

1–5 of 14

Authors

61

  1. ES
    Ellen Su

    Broad Institute, United States

    2 publications · 90 citations

    2

    h-index

  2. AE
    Anne E. Carpenter

    Broad Institute, United States

    2 publications · 90 citations

    2

    h-index

  3. JA
    John Arévalo

    Universidad Nacional de Colombia, Colombia

    2 publications · 90 citations

    2

    h-index

  4. SS
    Shantanu Singh

    Broad Institute, United States

    2 publications · 90 citations

    2

    h-index

  5. TB
    Tushar Bhangale

    Harvard University, United States

    1 publications · 68 citations

    1

    h-index

1–5 of 61

Institutions

25

  1. Broad Institute

    Cambridge, United States

    2 h-index

    11 publications

    517 citations

  2. Vall d'Hebron Institute of Oncology

    Barcelona, Spain

    1 h-index

    5 publications

    260 citations

  3. University of Padua

    Padua, Italy

    1 h-index

    1 publications

    31 citations

  4. Japan Meteorological Agency

    Tokyo, Japan

    1 h-index

    1 publications

    23 citations

  5. University of Florida

    Gainesville, United States

    1 h-index

    1 publications

    12 citations

  6. Japan Steel Works (Japan)

    Tokyo, Japan

    1 h-index

    2 publications

    46 citations

  7. Fudan University

    Shanghai, China

    1 h-index

    2 publications

    1.2K citations

  8. University of Zurich

    Zurich, Switzerland

    1 h-index

    2 publications

    96 citations

1–8 of 25

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 46 citations

    2

    h-index

  2. Statistics in Biosciences

    SIB · 1 publications · 31 citations

    1

    h-index

  3. Food Control

    1 publications · 12 citations

    1

    h-index

  4. Methods in molecular biology

    Book series · 1 publications · 48 citations

    1

    h-index

  5. PLoS ONE

    1 publications · 592 citations

    1

    h-index

1–5