Genomics · 2015 · 21 citations · 46 references
Life SciencesGeneticsMolecular GeneticsComparative GenomicsGene ExpressionGenomicsAnimal GenomicsCell Lineage SpecificationGene MappingGenomic AnnotationLineage ReconstructionLineage TracingGenome-wide CharacterizationLineage-specific EnhancersLineage-specific Gene ExpressionLineage-specific GenesLineage-specific MarkersLineage-specific Transcriptional ProgramsNematode Developmental Biology
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Basic local alignment search tool
Stephen F. Altschul, Warren Gish, Webb Miller et al. · Journal of Molecular Biology · 1990 · 94.5K citations
HTSeq—a Python framework to work with high-throughput sequencing data
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TopHat: discovering splice junctions with RNA-Seq
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<tt>BLAT</tt>—The <tt>BLAST</tt>-Like Alignment Tool
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