Frontiers in Pharmacology · 2023 · 20 citations · 43 references
Life SciencesCardiologyMolecular BiologyGene ExpressionMolecular PharmacologyTranscriptomicsCardiovascular Molecular PhysiologyIschemic Heart DiseaseSingle-cell Rna Sequencing AnalysisSingle-cell TranscriptomicsSpatial TranscriptomicsCardiac Tissue ModelsCardioprotective TherapyMechanisms Of Cardiac InjuryMyocardial Ischemia-reperfusion InjuryRna Sequencing (Rna-seq)Single-nucleus Rna SequencingSingle-nucleus SequencingSingle-nucleus Transcriptomics
Graphical Abstract Single-cell landscape of SBP treatments in a mouse model of myocardial I/R injury. A total of 75,546 cells from nine mouse cardiac tissues in 3 different groups are projected by UMAP plot. The four colored tracks (from inside to outside) indicate cluster, origin ID, group and cell type. The axis outside the circular plot depicts the scale of the total cell number for each class. The text in each of the four corners show an overview of the role of SBP on cardiomyocytes, endothelial cells, fibroblasts, and macrophages respectively. Legends denote the origin ID, group, cell type and cluster.
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STAR: ultrafast universal RNA-seq aligner
Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text