Concepedia

Survival-based CRISPR genetic screens across a panel of permissive cell lines identify common and cell-specific SARS-CoV-2 host factors

Katherine Chan, Adrian Granda Farias, Hunsang Lee, Furkan Guvenc, Patricia Mero, Kevin R. Brown, Henry N. Ward, Maximilian Billmann, Kamaldeep Aulakh, Audrey Astori,

Heliyon · 2022 · 25 citations · 68 references

DOIFull text

Open access

Concepts

Abstract

in Calu-3 cells had the strongest impact in preventing SARS-CoV-2 infection when perturbed.

References

68

limma powers differential expression analyses for RNA-sequencing and microarray studies

Matthew E. Ritchie, Belinda Phipson, Di Wu et al. · Nucleic Acids Research · 2015 · 43K citations · Full text

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SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

Markus Hoffmann, Hannah Kleine‐Weber, Simon Schroeder et al. · Cell · 2020 · 21.4K citations · Full text

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Salmon provides fast and bias-aware quantification of transcript expression

Rob Patro, Geet Duggal, Michael I. Love et al. · Nature Methods · 2017 · 13.7K citations · Full text

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The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

Jordi Barretina, Giordano Caponigro, Nicolas Stransky et al. · Nature · 2012 · 8.5K citations

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Molecular signatures database (MSigDB) 3.0

Arthur Liberzon, Aravind Subramanian, Reid M. Pinchback et al. · Bioinformatics · 2011 · 7.7K citations · Full text

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