Concepedia
Bioinformatics · 2022 · 64 citations · 30 references
Open access
Supplementary data are available at Bioinformatics online.
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CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks, Michael Imelfort, Connor T. Skennerton et al. · Genome Research · 2015 · 11.8K citations · Full text
MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies
Dongwan Kang, Feng Li, Edward Kirton et al. · PeerJ · 2019 · 3.6K citations · Full text
dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication
Matthew R. Olm, Christopher T. Brown, Brandon Brooks et al. · The ISME Journal · 2017 · 2.8K citations · Full text
Binning metagenomic contigs by coverage and composition
Johannes Alneberg, Brynjar Smári Bjarnason, Ino de Bruijn et al. · Nature Methods · 2014 · 2.8K citations
Functional Genomics, Molecular Ecology, Next-generation Sequencing +8
MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
Yu‐Wei Wu, Blake A. Simmons, Steven W. Singer · Bioinformatics · 2015 · 2.7K citations · Full text