Concepedia

Rumen and fecal microbial profiles in cattle fed high lignin diets using metagenome analysis

Munni Khatoon, Shriram Patel, Ramesh Pandit, Subhash J. Jakhesara, D. N. Rank, Chaitanya G. Joshi, Anju Kunjadiya

Anaerobe · 2021 · 32 citations · 23 references

DOI

Concepts

References

23

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

, , +17

Quality control and preprocessing of metagenomic datasets

Robert Schmieder, Robert A. Edwards · Bioinformatics · 2011 · 5.4K citations · Full text

, , +10

STAMP: statistical analysis of taxonomic and functional profiles

Donovan H. Parks, Gene W. Tyson, Philip Hugenholtz et al. · Bioinformatics · 2014 · 4.3K citations · Full text

, , +12

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

Pelin Yilmaz, Laura Wegener Parfrey, Pablo Yarza et al. · Nucleic Acids Research · 2013 · 4.1K citations · Full text

, , +17

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

Matthias Hess, Alexander Sczyrba, Rob Egan et al. · Science · 2011 · 1.4K citations

, , +17