Building the mega single-cell transcriptome ocular meta-atlas

Fast unfolding of communities in large networks

Vincent D. Blondel, Jean‐Loup Guillaume, Renaud Lambiotte et al. · Journal of Statistical Mechanics Theory and Experiment · 2008 · 20.5K citations · Full text

Engineering, Community Mining, Network Analysis +16

Comprehensive Integration of Single-Cell Data

Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16K citations · Full text

Engineering, Biomedical Data Integration, Data Science +11

Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler, Paul Hoffman, Peter Smibert et al. · Nature Biotechnology · 2018 · 14.1K citations · Full text

Engineering, Genetics, Multiomics +17

Near-optimal probabilistic RNA-seq quantification

Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 10.4K citations

Functional Genomics, Engineering, Genetics +7

Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 9.5K citations · Full text

Bioinformatics, Engineering, Data Science +14