Enrichment of microbial taxa after the onset of wheat yellow mosaic disease

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 33.5K citations · Full text

Illumina Amplicon Data, Omics Datasets, Spectral Searching +5

Classification and Regression by randomForest

Andy Liaw, Matthew C. Wiener · 2007 · 18.4K citations

Artificial Intelligence, Engineering, Machine Learning +19

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

Kazutaka Katoh · Nucleic Acids Research · 2002 · 17K citations · Full text

Metagenomic biomarker discovery and explanation

Nicola Segata, Jacques Izard, Levi Waldron et al. · Genome biology · 2011 · 15.8K citations · Full text

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

Morgan N. Price, Paramvir Dehal, Adam P. Arkin · PLoS ONE · 2010 · 15.1K citations · Full text