Concepedia

Longitudinal Multi-omics Reveals Subset-Specific Mechanisms Underlying Irritable Bowel Syndrome

Ruben A. Mars, Yi Yang, Tonya Ward, Mo Houtti, Sambhawa Priya, Heather Lekatz, Xiaojia Tang, Zhifu Sun, Krishna R. Kalari, Tal Korem,

Cell · 2020 · 449 citations · 43 references

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43

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

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BLAST+: architecture and applications

Christiam Camacho, George Coulouris, Vahram Avagyan et al. · BMC Bioinformatics · 2009 · 23.2K citations · Full text

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Daehwan Kim, Geo Pertea, Cole Trapnell et al. · Genome biology · 2013 · 13.7K citations · Full text

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Adjusting batch effects in microarray expression data using empirical Bayes methods

W. Evan Johnson, Cheng Li, Ariel Rabinovic · Biostatistics · 2006 · 9.1K citations · Full text

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Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

Brendan MacLean, Daniela M. Tomazela, Nicholas Shulman et al. · Bioinformatics · 2010 · 5K citations · Full text

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