bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 13 citations · 35 references
MedicineMolecular GeneticsPharmacologyCardiovascular GeneticsMedical GeneticsPrecision MedicineCardiovascular GenomicsCardiovascular PharmacogenomicsPharmacogenomic BiomarkersPolygenic Risk AssessmentPrecision Medicine GenomicsQuantitative Trait Loci MappingDrug Target ValidationNovel Circulating BiomarkersPersonalized Cardiovascular MedicinePharmacogenomic Biomarker DiscoveryPrecision Medicine ApplicationsProtein Quantitative Trait Loci
Abstract Circulating proteins are vital in human health and disease and are frequently used as biomarkers for clinical decision-making or as targets for pharmacological intervention. By mapping and replicating protein quantitative trait loci (pQTL) for 90 cardiovascular proteins in over 30,000 individuals, we identified 467 pQTLs for 85 proteins. The pQTLs were used in combination with other sources of information to evaluate known drug targets, and suggest new target candidates or repositioning opportunities, underpinned by a) causality assessment using Mendelian randomization, b) pathway mapping using trans -pQTL gene assignments, and c) protein-centric polygenic risk scores enabling matching of plausible target mechanisms to sub-groups of individuals enabling precision medicine.
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The UK Biobank resource with deep phenotyping and genomic data
Clare Bycroft, Colin Freeman, Desislava Petkova et al. · Nature · 2018 · 9.7K citations · Full text
GCTA: A Tool for Genome-wide Complex Trait Analysis
Jian Yang, Sang Lee, Michael E. Goddard et al. · The American Journal of Human Genetics · 2010 · 9.3K citations · Full text
Genetic effects on gene expression across human tissues