Obstacles to Studying Alternative Splicing Using scRNA-seq

Near-optimal probabilistic RNA-seq quantification

Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 11K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +6

Alternative isoform regulation in human tissue transcriptomes

Eric T. Wang, Rickard Sandberg, Shujun Luo et al. · Nature · 2008 · 5.4K citations · Full text

Life Sciences, Cell Biology, Molecular Biology +13

GENCODE reference annotation for the human and mouse genomes

Adam Frankish, Mark Diekhans, Anne-Maud Ferreira et al. · Nucleic Acids Research · 2018 · 3.5K citations · Full text

Life Sciences, Bioinformatics, Genetics +14

Bayesian approach to single-cell differential expression analysis

Peter V. Kharchenko, Lev Silberstein, David T. Scadden · Nature Methods · 2014 · 1.5K citations · Full text

Life Sciences, Bioinformatics, Cell Biology +14

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

Alex K. Shalek, Rahul Satija, Xian Adiconis et al. · Nature · 2013 · 1.3K citations · Full text

Life Sciences, Cell Biology, Molecular Biology +14