Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.1K citations · Full text

Massively parallel digital transcriptional profiling of single cells

Grace Zheng, Jessica M. Terry, Phillip Belgrader et al. · Nature Communications · 2017 · 7.4K citations · Full text

Spatial reconstruction of single-cell gene expression data

Rahul Satija, Jeffrey A. Farrell, David Gennert et al. · Nature Biotechnology · 2015 · 7.3K citations · Full text

Functional Genomics, Engineering, Single Cell Sequencing +10

Integrative analysis of 111 reference human epigenomes

Anshul Kundaje, Wouter Meuleman, Jason Ernst et al. · Nature · 2015 · 6.9K citations · Full text

Bioinformatics, Chromatin, Genome-wide Association Study +14

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Jason D. Buenrostro, Paul G. Giresi, Lisa C. Zaba et al. · Nature Methods · 2013 · 6.8K citations · Full text

Chromatin, Native Chromatin, Chromatin Remodeling +15