Development · 2019 · 138 citations · 41 references
Life SciencesCell BiologyDevelopmental BiologyEmbryogenesisMorphogenesisPattern FormationEmbryonic PatterningEmbryonic Stem CellsEpithelial-mesenchymal TransitionEpithelial-to-mesenchymal TransitionMorphogen SignalingWnt SignalingBistable MechanismsEpithelial-mesenchymal PatterningEpithelial-mesenchymal Transition In DevelopmentHuman Embryonic Stem CellsPrimitive Streak DifferentiationWnt In Cell Fate SpecificationWnt In MorphogenesisWnt Ligands
Long-range signaling by morphogens and their inhibitors define embryonic patterning yet quantitative data and models are rare, especially in humans. Here, we use a human embryonic stem cell micropattern system to model formation of the primitive streak (PS) by WNT. In the pluripotent state, E-cadherin (E-CAD) transduces boundary forces to focus WNT signaling to the colony border. Following application of WNT ligand, E-CAD mediates a front or wave of epithelial-to-mesenchymal (EMT) conversion analogous to PS extension in an embryo. By knocking out the secreted WNT inhibitors active in our system, we show that DKK1 alone controls the extent and duration of patterning. The NODAL inhibitor cerberus 1 acts downstream of WNT to refine the endoderm versus mesoderm fate choice. Our EMT wave is a generic property of a bistable system with diffusion and we present a single quantitative model that describes both the wave and our knockout data.
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Multiplex Genome Engineering Using CRISPR/Cas Systems
Le Cong, F. Ann Ran, David Cox et al. · Science · 2013 · 15.7K citations
Easy quantitative assessment of genome editing by sequence trace decomposition
Eva K. Brinkman, Tao Chen, Mario Amendola et al. · Nucleic Acids Research · 2014 · 2.6K citations · Full text
Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps
Lisa A. Levin, Guillermo Mendoza, B Grupe et al. · PLoS ONE · 2015 · 2.2K citations · Full text
Life Sciences, Ecology, Geology +14