Minimap2: pairwise alignment for nucleotide sequences - Concepedia

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Publication | Open Access

Minimap2: pairwise alignment for nucleotide sequences

DOI Full Paper Access

15.5K

Citations

40

References

2018

Year

Abstract

Supplementary data are available at Bioinformatics online.

References

	Year	Citations
The Sequence Alignment/Map format and SAMtools Heng Li, Alec Wysoker, Tim Fennell, Bioinformatics	2009	64.7K
Fast and accurate short read alignment with Burrows–Wheeler transform Heng Li, Richard Durbin Bioinformatics	2009	60.7K
Fast gapped-read alignment with Bowtie 2 Ben Langmead, Steven L. Salzberg Nature Methods Long-read SequencingSequence AssemblyNatural SciencesComputational BiologyMolecular Biology	2012	58.3K
STAR: ultrafast universal RNA-seq aligner Alexander Dobin, Carrie Davis, Felix Schlesinger, Bioinformatics	2012	53.2K
Fast and accurate long-read alignment with Burrows–Wheeler transform Heng Li, Richard Durbin Bioinformatics Abstract MotivationGeneticsMolecular BiologyGenomicsSequence Alignment	2010	12.5K
A framework for variation discovery and genotyping using next-generation DNA sequencing data Mark A. DePristo, Eric Banks, Ryan Poplin, Nature Genetics Dna SequencingSequencingMedicineGeneticsComputational Genomics	2011	12.1K
Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM Heng Li arXiv (Cornell University)	2014	5.8K
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM Heng Li DROPS (Schloss Dagstuhl – Leibniz Center for Informatics) GeneticsMolecular BiologySequence ReadsGenomicsSequence Alignment	2013	5.2K
GMAP: a genomic mapping and alignment program for mRNA and EST sequences Ting‐Di Wu, C.K. Watanabe Computer applications in the biosciences	2005	2.6K
MUMmer4: A fast and versatile genome alignment system Guillaume Marçais, Arthur L. Delcher, Adam M. Phillippy, PLoS Computational Biology Large GenomesGeneticsMolecular BiologyGenomicsSequence Alignment	2018	2.6K

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