Journal of Medicinal Chemistry · 2017 · 38 citations · 17 references
MedicineMedicinal ChemistryPharmacologyDrug DiscoveryMolecular PharmacologyStructure-activity RelationshipsAntibacterial AgentsAntibacterial PharmacologyAntifungal PharmacologyCytochrome P450 EnzymesCytochrome P450 InteractionsAffinity AssaysAntimicrobial Drug DevelopmentCompetitive Binding InteractionsCytochrome P450 Enzyme InhibitionImidazole ChemistryInhibitor ClassificationNovel Antibacterial Drug DiscoveryPyrazole Chemistry
High Resolution Image Download MS PowerPoint Slide Three series of biarylpyrazole imidazole and triazoles are described, which vary in the linker between the biaryl pyrazole and imidazole/triazole group. The imidazole and triazole series with the short −CH 2 – linker displayed promising antimycobacterial activity, with the imidazole–CH 2 – series ( 7 ) showing low MIC values (6.25–25 μg/mL), which was also influenced by lipophilicity. Extending the linker to −C(O)NH(CH 2 ) 2 – resulted in a loss of antimycobacterial activity. The binding affinity of the compounds with CYP121A1 was determined by UV–visible optical titrations with K D values of 2.63, 35.6, and 290 μM, respectively, for the tightest binding compounds 7e, 8b, and 13d from their respective series. Both binding affinity assays and docking studies of the CYP121A1 inhibitors suggest type II indirect binding through interstitial water molecules, with key binding residues Thr77, Val78, Val82, Val83, Met86, Ser237, Gln385, and Arg386, comparable with the binding interactions observed with fluconazole and the natural substrate dicyclotyrosine.
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Features and development of <i>Coot</i>
Paul Emsley, Bernhard Lohkamp, W. G. Scott et al. · Acta Crystallographica Section D Biological Crystallography · 2010 · 29.6K citations · Full text
Wolfgang Kabsch · Acta Crystallographica Section D Biological Crystallography · 2010 · 16.9K citations · Full text