Concepedia

MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads

Chuan‐Le Xiao, Ying Chen, Kaining Chen, Yan Wang, Yue Han, Feng Luo, Zhi Xie

Nature Methods · 2017 · 469 citations · 16 references

DOI

Concepts

References

16

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

Canu: scalable and accurate long-read assembly via adaptive <i>k</i> -mer weighting and repeat separation

Sergey Koren, Brian P. Walenz, Konstantin Berlin et al. · Genome Research · 2017 · 8.2K citations · Full text

, , +16

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

Chen-Shan Chin, David H. Alexander, Patrick Marks et al. · Nature Methods · 2013 · 4.3K citations

, , +14

Real-Time DNA Sequencing from Single Polymerase Molecules

John Eid, Adrian Fehr, Jeremy Gray et al. · Science · 2008 · 3.8K citations

, , +12

Phased diploid genome assembly with single-molecule real-time sequencing

Chen-Shan Chin, Paul Peluso, Fritz J. Sedlazeck et al. · Nature Methods · 2016 · 2.2K citations · Full text

, , +13