Concepedia

Lineage-specific dynamic and pre-established enhancer–promoter contacts cooperate in terminal differentiation

Adam J. Rubin, Brook C. Barajas, Mayra Furlan-Magaril, Vanessa Lopez-Pajares, Maxwell R. Mumbach, I. BRIAN HOWARD, Daniel Sunwook Kim, Jonathan Cairns, Mikhail Spivakov, Steven Wingett,

Nature Genetics · 2017 · 325 citations · 41 references

DOI

Concepts

References

41

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

, , +14

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang, Brad T. Sherman, Richard A. Lempicki · Nature Protocols · 2008 · 37.4K citations

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A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

Suhas S.P. Rao, Miriam Huntley, Neva C. Durand et al. · Cell · 2014 · 9.9K citations · Full text

, , +14

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Jesse R. Dixon, Siddarth Selvaraj, Feng Yue et al. · Nature · 2012 · 7.4K citations · Full text

, , +16

Integrative analysis of 111 reference human epigenomes

Anshul Kundaje, Wouter Meuleman, Jason Ernst et al. · Nature · 2015 · 7.1K citations · Full text

, , +16