G3 Genes Genomes Genetics · 2017 · 33 citations · 67 references
Life SciencesPlant BiologyPlant SciencesMolecular EvolutionPlant BiochemistryPlant Molecular BiologyChaperone-assisted FoldingChaperone-mediated FoldingMolecular ChaperonesProtein StructureChaperone-protein ComplexesEvolutionary Conservation AnalysisHsp70 Chaperone SystemPlant Functional DiversityProtein Chaperone NetworksProtein Network AnalysisProtein Network StructureProteostasis
Abstract Heat shock proteins of 70 kDa (Hsp70s) partner with structurally diverse Hsp40s (J proteins), generating distinct chaperone networks in various cellular compartments that perform myriad housekeeping and stress-associated functions in all organisms. Plants, being sessile, need to constantly maintain their cellular proteostasis in response to external environmental cues. In these situations, the Hsp70:J protein machines may play an important role in fine-tuning cellular protein quality control. Although ubiquitous, the functional specificity and complexity of the plant Hsp70:J protein network has not been studied. Here, we analyzed the J protein network in the cytosol of Arabidopsis thaliana and, using yeast genetics, show that the functional specificities of most plant J proteins in fundamental chaperone functions are conserved across long evolutionary timescales. Detailed phylogenetic and functional analysis revealed that increased number, regulatory differences, and neofunctionalization in J proteins together contribute to the emerging functional diversity and complexity in the Hsp70:J protein network in higher plants. Based on the data presented, we propose that higher plants have orchestrated their “chaperome,” especially their J protein complement, according to their specialized cellular and physiological stipulations.
67
The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling
Konstantin Arnold, Lorenza Bordoli, Jürgen Kopp et al. · Bioinformatics · 2005 · 7.1K citations · Full text
Global analysis of protein expression in yeast
Sina Ghaemmaghami, Won‐Ki Huh, Kiowa Bower et al. · Nature · 2003 · 3.8K citations