Chemical Science · 2014 · 17 citations · 35 references
Life SciencesBiochemistryMicrobiologyEnzyme MechanismEnzymologyProtein BiochemistryEnzyme DiscoveryEnzyme KineticsEnzyme-substrate RecognitionHydrolase CatalysisPeptide ChemistryProtein ChemistryAcyl Carrier Protein FunctionDeterminants Of Substrate SelectivityEnzyme-substrate SelectivitySubstrate Selectivity
Evaluation of new acyl carrier protein hydrolase (AcpH, EC 3.1.4.14) homologs from proteobacteria and cyanobacteria reveals significant variation in substrate selectivity and kinetic parameters for phosphopantetheine hydrolysis from carrier proteins. Evaluation with carrier proteins from both primary and secondary metabolic pathways reveals an overall preference for acyl carrier protein (ACP) substrates from type II fatty acid synthases, as well as variable activity for polyketide synthase ACPs and peptidyl carrier proteins (PCP) from non-ribosomal peptide synthases. We also demonstrate the kinetic parameters of these homologs for AcpP and the 11-mer peptide substrate YbbR. These findings enable the fully reversible labeling of all three classes of natural product synthase carrier proteins as well as full and minimal fusion protein constructs.
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Phylogeny.fr: robust phylogenetic analysis for the non-specialist
Alexis Dereeper, Valentin Guignon, Guillaume Blanc et al. · Nucleic Acids Research · 2008 · 4.8K citations · Full text
Site-specific protein labeling by Sfp phosphopantetheinyl transferase
Jun Yin, Alison J. Lin, David E. Golan et al. · Nature Protocols · 2006 · 341 citations