Concepedia

Census of the Viral Metagenome within an Activated Sludge Microbial Assemblage

Larissa C. Parsley, Erin J. Consuegra, Stephen J. Thomas, Jaysheel Bhavsar, Andrew M. Land, Nadia N. Bhuiyan, Mustafa Mazher, R. Jordan Waters, K. Eric Wommack, Willie F. Harper,

Applied and Environmental Microbiology · 2010 · 55 citations · 17 references

Open access

Abstract

The viral metagenome within an activated sludge microbial assemblage was sampled using culture-dependent and culture-independent methods and compared to the diversity of activated sludge bacterial taxa. A total of 70 unique cultured bacterial isolates, 24 cultured bacteriophages, 829 bacterial metagenomic clones of 16S rRNA genes, and 1,161 viral metagenomic clones were subjected to a phylogenetic analysis.

References

17

Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses.

David Lane, B Pace, G J Olsen et al. · Proceedings of the National Academy of Sciences · 1985 · 3.1K citations · Full text

Life Sciences, Microbiology, Molecular Biology +16

The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes

Ross Overbeek · Nucleic Acids Research · 2005 · 2.1K citations · Full text

Life Sciences, Bioinformatics, Biology +8

Genomic analysis of uncultured marine viral communities

Mya Breitbart, Peter Salamon, Bjarne Andresen et al. · Proceedings of the National Academy of Sciences · 2002 · 985 citations

Life Sciences, Marine Biology, Microbiology +17

Functional metagenomic profiling of nine biomes

Elizabeth A. Dinsdale, Robert A. Edwards, Dana Hall et al. · Nature · 2008 · 979 citations

Life Sciences, Microbiology, Genomics +11

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

Florent Angly, Beltrán Rodriguez-Brito, David Bangor et al. · BMC Bioinformatics · 2005 · 200 citations · Full text

Life Sciences, Biology, Microbiology +6