Concepedia

High-resolution mapping of transcription factor binding sites on native chromatin

Sivakanthan Kasinathan, Guillermo A. Orsi, Gabriel E. Zentner, Kami Ahmad, Steven Henikoff

Nature Methods · 2013 · 195 citations · 61 references

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61

NIH Image to ImageJ: 25 years of image analysis

Caroline A Schneider, Wayne Rasband, Kevin W. Eliceiri · Nature Methods · 2012 · 65.2K citations

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BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Jason D. Buenrostro, Paul G. Giresi, Lisa C. Zaba et al. · Nature Methods · 2013 · 7K citations · Full text

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Fitting a mixture model by expectation maximization to discover motifs in biopolymers.

Trisha L. Bailey, Charles Elkan · PubMed · 1994 · 5.1K citations

, , +16

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

Adam Siepel, Gill Bejerano, Jakob Skou Pedersen et al. · Genome Research · 2005 · 4.3K citations · Full text

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