Science · 2015 · 415 citations · 61 references
Life SciencesImmunologyMicrobiologyHost-pathogen InteractionsImmunogeneticsInnate ImmunityImmune DysfunctionImmune RegulationImmune Responses To InfectionInnate Immune ResponseOpportunistic InfectionsSusceptibility To InfectionFungal Infection ImmunityHost Defenses Against Opportunistic PathogensImmune System DisruptionInnate Antifungal ImmunityInnate Immune DefectsInterleukin-17 PathwayLoss-of-function MutationsLoss-of-function Receptor Mutations
Human inborn errors of immunity mediated by the cytokines interleukin-17A and interleukin-17F (IL-17A/F) underlie mucocutaneous candidiasis, whereas inborn errors of interferon-γ (IFN-γ) immunity underlie mycobacterial disease. We report the discovery of bi-allelic RORC loss-of-function mutations in seven individuals from three kindreds of different ethnic origins with both candidiasis and mycobacteriosis. The lack of functional RORγ and RORγT isoforms resulted in the absence of IL-17A/F-producing T cells in these individuals, probably accounting for their chronic candidiasis. Unexpectedly, leukocytes from RORγ- and RORγT-deficient individuals also displayed an impaired IFN-γ response to Mycobacterium. This principally reflected profoundly defective IFN-γ production by circulating γδ T cells and CD4(+)CCR6(+)CXCR3(+) αβ T cells. In humans, both mucocutaneous immunity to Candida and systemic immunity to Mycobacterium require RORγ, RORγT, or both.
61
The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text