Concepedia

Tumor Microenvironment Deconvolution

Tumor Microenvironment Deconvolution is a computational method within cell-type deconvolution that specifically resolves the cellular composition of the tumor microenvironment by distinguishing malignant, stromal, and immune cell populations from bulk tissue gene expression profiles.

45

Publications

4.5K

Citations

422

Authors

184

Institutions

Publications per year

2017–2026

44

Parents

Publications

45

Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology

Gregor Sturm, Francesca Finotello, Florent Petitprez et al. · Bioinformatics · 2019 · 1K citations · Full text

, , +17

Deconvoluting tumor-infiltrating immune cells from RNA-seq data using quanTIseq

Christina Plattner, Francesca Finotello, Dietmar Rieder · Methods in enzymology on CD-ROM/Methods in enzymology · 2019 · 330 citations

, , +14

A Gene Signature Predicting Natural Killer Cell Infiltration and Improved Survival in Melanoma Patients

Joseph Cursons, Fernando Souza-Fonseca-Guimarães, Momeneh Foroutan et al. · Cancer Immunology Research · 2019 · 292 citations · Full text

, , +17

Pediatric pan-central nervous system tumor analysis of immune-cell infiltration identifies correlates of antitumor immunity

Yura Grabovska, Alan Mackay, Patricia O’Hare et al. · Nature Communications · 2020 · 232 citations · Full text

, , +17

Profiles of immune cell infiltration and immune-related genes in the tumor microenvironment of colorectal cancer

Penglei Ge, Weiwei Wang, Lin Li et al. · Biomedicine & Pharmacotherapy · 2019 · 230 citations · Full text

, , +17

1–5 of 45

Authors

422

  1. RS
    Robert Sebra

    Icahn School of Medicine at Mount Sinai, United States

    4 publications · 204 citations

    4

    h-index

  2. AM
    Alexander M. Tsankov

    Broad Institute, United States

    2 publications · 172 citations

    2

    h-index

  3. FF
    Francesca Finotello

    Innsbruck Medical University, Austria

    2 publications · 1.3K citations

    2

    h-index

  4. RB
    Rachel Brody

    Icahn School of Medicine at Mount Sinai, United States

    2 publications · 79 citations

    2

    h-index

  5. EK
    Evgeny Kiner

    Harvard University, United States

    2 publications · 177 citations

    2

    h-index

1–5 of 422

Institutions

184

  1. Icahn School of Medicine at Mount Sinai

    New York, United States

    5 h-index

    67 publications

    5.2K citations

  2. Sungkyunkwan University

    Seoul, South Korea

    2 h-index

    2 publications

    90 citations

  3. National Institutes of Health

    Bethesda, United States

    2 h-index

    12 publications

    633 citations

  4. University of Michigan

    Ann Arbor, United States

    2 h-index

    3 publications

    258 citations

  5. Innsbruck Medical University

    Innsbruck, Austria

    2 h-index

    4 publications

    2K citations

  6. Newcastle University

    Newcastle upon Tyne, United Kingdom

    2 h-index

    13 publications

    2.4K citations

  7. National Cancer Institute

    Bethesda, United States

    2 h-index

    12 publications

    633 citations

  8. Universitat de Barcelona

    Barcelona, Spain

    2 h-index

    3 publications

    413 citations

1–8 of 184

Venues

  1. Nature Communications

    4 publications · 485 citations

    4

    h-index

  2. Bioinformatics

    3 publications · 1.1K citations

    3

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 25 citations

    2

    h-index

  4. Cancer Discovery

    2 publications · 90 citations

    2

    h-index

  5. Gut

    2 publications · 198 citations

    2

    h-index

1–5