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Transcriptome Assembly Evaluation

Transcriptome Assembly Evaluation is a computational assessment method that quantifies the accuracy, completeness, and structural fidelity of reconstructed transcript sequences relative to biological ground truth or reference data in transcriptome assembly.

150

Publications

7.6K

Citations

982

Authors

376

Institutions

Publications per year

2017–2026

75

Parents

Publications

150

TransRate: reference-free quality assessment of de novo transcriptome assemblies

Richard Smith-Unna, Chris Boursnell, Rob Patro et al. · Genome Research · 2016 · 918 citations · Full text

, , +17

Evaluation of de novo transcriptome assemblies from RNA-Seq data

Bo Li, Nathanael R. Fillmore, Yongsheng Bai et al. · Genome biology · 2014 · 313 citations · Full text

, , +14

Transcriptome Analysis of the Brown Planthopper Nilaparvata lugens

Jian Xue, Yan‐Yuan Bao, Bao-ling Li et al. · PLoS ONE · 2010 · 250 citations · Full text

, , +15

Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly

Tatsiana Aneichyk, William T. Hendriks, Rachita Yadav et al. · Cell · 2018 · 236 citations · Full text

, , +14

Transcriptomic analysis of ‘Suli’ pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq

Guoqin Liu, Wanshun Li, Tong Xu et al. · BMC Genomics · 2012 · 159 citations · Full text

, , +15

1–5 of 150

Authors

982

  1. MD
    Matthew D. MacManes

    University of New Hampshire, United States

    3 publications · 96 citations

    3

    h-index

  2. RP
    Rob Patro

    Stony Brook University, United States

    3 publications · 1.1K citations

    3

    h-index

  3. AN
    Ashley N. Egan

    Cornell University, United States

    2 publications · 82 citations

    2

    h-index

  4. JM
    Julian M. Hibberd

    University of Cambridge, United Kingdom

    2 publications · 967 citations

    2

    h-index

  5. JS
    J. Scott McElroy

    Auburn University, United States

    2 publications · 66 citations

    2

    h-index

1–5 of 982

Institutions

376

  1. Chinese Academy of Sciences

    Beijing, China

    8 h-index

    30 publications

    880 citations

  2. South China Agricultural University

    Guangzhou, China

    5 h-index

    13 publications

    930 citations

  3. Purdue University West Lafayette

    West Lafayette, United States

    4 h-index

    9 publications

    476 citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    4 h-index

    13 publications

    535 citations

  5. BGI Group (China)

    Shenzhen, China

    4 h-index

    18 publications

    2.1K citations

  6. Stony Brook University

    Stony Brook, United States

    3 h-index

    6 publications

    1.4K citations

  7. Michigan State University

    East Lansing, United States

    3 h-index

    6 publications

    533 citations

  8. Cornell University

    Ithaca, United States

    3 h-index

    4 publications

    178 citations

1–8 of 376

Venues

  1. BMC Genomics

    23 publications · 1.3K citations

    19

    h-index

  2. PLoS ONE

    17 publications · 1.1K citations

    15

    h-index

  3. Scientific Reports

    14 publications · 583 citations

    13

    h-index

  4. BMC Plant Biology

    6 publications · 190 citations

    6

    h-index

  5. Genomics Data

    5 publications · 87 citations

    5

    h-index

1–5