Concepedia

Taxonomic Annotation

Taxonomic Annotation is a scholarly contribution that assigns or refines the biological classification of cultured organisms within a culture collection by applying taxonomic principles, criteria, or nomenclature to ensure accurate, consistent, and scientifically valid identification at the strain, species, or higher taxonomic level.

331

Publications

62.4K

Citations

1.8K

Authors

845

Institutions

Publications per year

2017–2026

171

Parents

Publications

331

Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

Todd Z. DeSantis, Philip Hugenholtz, N. Larsen et al. · Applied and Environmental Microbiology · 2006 · 11.2K citations · Full text

, , +17

Shifting the genomic gold standard for the prokaryotic species definition

Michael Richter, Ramon Rosselló‐Móra · Proceedings of the National Academy of Sciences · 2009 · 6.3K citations · Full text

, , +13

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

Nicholas A. Bokulich, Benjamin D. Kaehler, Jai Ram Rideout et al. · Microbiome · 2018 · 6.1K citations · Full text

, , +17

Interactive Tree of Life (iTOL) v6: recent updates to the phylogenetic tree display and annotation tool

Ivica Letunić, Peer Bork · Nucleic Acids Research · 2024 · 3.8K citations · Full text

, , +17

The carbohydrate-active enzyme database: functions and literature

Élodie Drula, Marie-Line Garron, Suzan Doğan et al. · Nucleic Acids Research · 2021 · 2.4K citations · Full text

, , +16

1–5 of 331

Authors

1.8K

  1. NC
    Nikos C. Kyrpides

    Joint Genome Institute, United States

    6 publications · 2.5K citations

    6

    h-index

  2. RK
    Rob Knight

    University of California San Diego, United States

    6 publications · 6.2K citations

    6

    h-index

  3. JG
    J. Gregory Caporaso

    Northern Arizona University, United States

    5 publications · 6.2K citations

    5

    h-index

  4. EF
    Enevold Falsen

    University of Gothenburg, Sweden

    5 publications · 338 citations

    5

    h-index

  5. JR
    Jai Ram Rideout

    Northern Arizona University, United States

    5 publications · 6.2K citations

    5

    h-index

1–5 of 1.8K

Institutions

845

  1. Centre National de la Recherche Scientifique

    Paris, France

    13 h-index

    56 publications

    30.8K citations

  2. University of California San Diego

    San Diego, United States

    11 h-index

    22 publications

    8.1K citations

  3. University of Gothenburg

    Gothenburg, Sweden

    10 h-index

    26 publications

    3.8K citations

  4. University of Copenhagen

    Copenhagen, Denmark

    10 h-index

    47 publications

    1.4K citations

  5. European Bioinformatics Institute

    Cambridge, United Kingdom

    8 h-index

    19 publications

    4.3K citations

  6. University of Cambridge

    Cambridge, United Kingdom

    8 h-index

    11 publications

    862 citations

  7. Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures

    Braunschweig, Germany

    7 h-index

    19 publications

    5.8K citations

  8. Natural History Museum

    London, United Kingdom

    7 h-index

    24 publications

    11.5K citations

1–8 of 845

Venues

  1. Nucleic Acids Research

    15 publications · 8.8K citations

    14

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 15 publications · 438 citations

    13

    h-index

  3. BMC Genomics

    14 publications · 964 citations

    13

    h-index

  4. PLoS ONE

    12 publications · 2K citations

    12

    h-index

  5. Bioinformatics

    13 publications · 1.9K citations

    12

    h-index

1–5