Concepedia

Structural Variant Filtering

Structural Variant Filtering is a computational method that distinguishes high-confidence structural variants from false or low-quality calls by applying specific criteria such as read depth, mapping quality, and population frequency within genomic sequencing data analysis.

17

Publications

1.1K

Citations

134

Authors

86

Institutions

Publications per year

2017–2026

14

Parents

Publications

17

Detection of mosaic and population-level structural variants with Sniffles2

Moritz Smolka, Luis F. Paulin, Christopher M. Grochowski et al. · Nature Biotechnology · 2024 · 439 citations · Full text

, , +17

Samplot: a platform for structural variant visual validation and automated filtering

Jonathan R. Belyeu, Murad Chowdhury, Joseph Brown et al. · Genome biology · 2021 · 146 citations · Full text

, , +17

SVision: a deep learning approach to resolve complex structural variants

Jiadong Lin, Songbo Wang, Peter A. Audano et al. · Nature Methods · 2022 · 110 citations · Full text

, , +11

High-coverage nanopore sequencing of samples from the 1000 Genomes Project to build a comprehensive catalog of human genetic variation

Jonas A. Gustafson, Sophia B Gibson, Nikhita Damaraju et al. · Genome Research · 2024 · 77 citations · Full text

, , +17

A deep learning approach for filtering structural variants in short read sequencing data

Yongzhuang Liu, Yalin Huang, Guohua Wang et al. · Briefings in Bioinformatics · 2020 · 56 citations

, , +17

1–5 of 17

Authors

134

  1. FJ
    Fritz J. Sedlazeck

    Baylor College of Medicine, United States

    5 publications · 617 citations

    5

    h-index

  2. MC
    Murad Chowdhury

    University of Colorado Boulder, United States

    3 publications · 173 citations

    3

    h-index

  3. AR
    Aaron R. Quinlan

    University of Utah, United States

    3 publications · 173 citations

    3

    h-index

  4. RM
    Ryan M. Layer

    University of Utah, United States

    3 publications · 173 citations

    3

    h-index

  5. BS
    Brent S. Pedersen

    University of Utah, United States

    3 publications · 173 citations

    3

    h-index

1–5 of 134

Institutions

86

  1. University of Utah

    Salt Lake City, United States

    5 h-index

    13 publications

    931 citations

  2. Baylor College of Medicine

    Houston, United States

    5 h-index

    14 publications

    3.8K citations

  3. Stanford University

    Stanford, United States

    3 h-index

    12 publications

    576 citations

  4. University of Colorado Boulder

    Boulder, United States

    3 h-index

    6 publications

    346 citations

  5. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    3 h-index

    9 publications

    321 citations

  6. New York Genome Center

    New York, United States

    3 h-index

    15 publications

    843 citations

  7. Rice University

    Houston, United States

    3 h-index

    3 publications

    557 citations

  8. Universidad Nacional Autónoma de México

    Mexico City, Mexico

    3 h-index

    4 publications

    212 citations

1–8 of 86

Venues

  1. Nature Methods

    3 publications · 157 citations

    3

    h-index

  2. PLoS ONE

    1 publications · 24 citations

    2

    h-index

  3. Bioinformatics

    1 publications · 22 citations

    1

    h-index

  4. Nature Communications

    1 publications · 37 citations

    1

    h-index

  5. Nature Biotechnology

    1 publications · 439 citations

    1

    h-index

1–5