Concepedia

Strain-level Variation Analysis

Strain-Level Variation Analysis is a methodological framework in comparative metagenomics that identifies and quantifies genetic differences among microbial strains within a species to elucidate functional, ecological, or evolutionary distinctions that are not discernible at the species level.

317

Publications

20K

Citations

1.5K

Authors

498

Institutions

Publications per year

2017–2026

63

Parents

Publications

317

Microbial strain-level population structure and genetic diversity from metagenomes

Duy Tin Truong, Adrian Tett, Edoardo Pasolli et al. · Genome Research · 2017 · 951 citations · Full text

, , +15

Distinct PrP properties suggest the molecular basis of strain variation in transmissible mink encephalopathy

Richard A. Bessen, Richard F. Marsh · Journal of Virology · 1994 · 664 citations · Full text

, , +17

Ensembl 2007

Tim Hubbard, Bronwen Aken, Kathryn Beal et al. · Nucleic Acids Research · 2006 · 642 citations · Full text

, , +16

An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography

Stephen Nayfach, Beltran Rodriguez-Mueller, Nandita R. Garud et al. · Genome Research · 2016 · 531 citations · Full text

, , +14

Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life

Moran Yassour, Eeva Jason, Larson Hogstrom et al. · Cell Host & Microbe · 2018 · 496 citations · Full text

, , +16

1–5 of 317

Authors

1.5K

  1. JF
    Jillian F. Banfield

    University of California, Berkeley, United States

    5 publications · 582 citations

    5

    h-index

  2. BC
    Brian C. Thomas

    University of California, Berkeley, United States

    4 publications · 426 citations

    4

    h-index

  3. AT
    Adrian Tett

    University of Trento, Italy

    3 publications · 1.7K citations

    3

    h-index

  4. QH
    Qiushui He

    University of Turku, Finland

    3 publications · 142 citations

    3

    h-index

  5. AC
    A. Colorni

    Israel Oceanographic and Limnological Research, Israel

    3 publications · 136 citations

    3

    h-index

1–5 of 1.5K

Institutions

498

  1. Harvard University

    Cambridge, United States

    8 h-index

    19 publications

    2.5K citations

  2. University of North Carolina at Chapel Hill

    Chapel Hill, United States

    7 h-index

    23 publications

    1.7K citations

  3. University of California, Berkeley

    Berkeley, United States

    6 h-index

    21 publications

    2.3K citations

  4. Johns Hopkins University

    Baltimore, United States

    6 h-index

    11 publications

    392 citations

  5. University of California, Davis

    Davis, United States

    6 h-index

    12 publications

    699 citations

  6. University of Wisconsin–Madison

    Madison, United States

    5 h-index

    16 publications

    734 citations

  7. Cornell University

    Ithaca, United States

    5 h-index

    9 publications

    517 citations

  8. Stanford University

    Stanford, United States

    5 h-index

    31 publications

    4.4K citations

1–8 of 498

Venues

  1. PubMed

    Repository · 14 publications · 450 citations

    12

    h-index

  2. Journal of Clinical Microbiology

    JCM · 11 publications · 1K citations

    11

    h-index

  3. Frontiers in Microbiology

    8 publications · 385 citations

    8

    h-index

  4. PLoS ONE

    8 publications · 406 citations

    8

    h-index

  5. Journal of Virology

    JVI · 8 publications · 1.2K citations

    8

    h-index

1–5