Concepedia

Single-cell Transcriptome Assembly

Single-Cell Transcriptome Assembly is a computational method for reconstructing the complete set of RNA transcripts expressed in an individual cell, enabling high-resolution characterization of cellular heterogeneity and gene expression dynamics at the single-cell level.

17

Publications

2.6K

Citations

124

Authors

57

Institutions

Publications per year

2017–2026

15

Parents

Publications

17

Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

Mitchell Guttman, Manuel Garber, Joshua Z. Levin et al. · Nature Biotechnology · 2010 · 1.3K citations · Full text

, , +13

Large-scale foundation model on single-cell transcriptomics

Minsheng Hao, Jing Gong, Xin Zeng et al. · Nature Methods · 2024 · 457 citations

, , +11

Comprehensive single-cell transcriptome lineages of a proto-vertebrate

Cao Chen, Laurence A. Lemaire, Wei Wang et al. · Nature · 2019 · 257 citations · Full text

, , +12

Dissection of Influenza Infection In Vivo by Single-Cell RNA Sequencing

Yael Steuerman, Merav Cohen, Naama Peshes‐Yaloz et al. · Cell Systems · 2018 · 228 citations · Full text

, , +14

RNA-Bloom enables reference-free and reference-guided sequence assembly for single-cell transcriptomes

Ka Ming Nip, Readman Chiu, Chen Yang et al. · Genome Research · 2020 · 100 citations · Full text

, , +16

1–5 of 17

Authors

124

  1. CJ
    Chuanqi Jiang

    Institute of Hydrobiology, China

    2 publications · 44 citations

    2

    h-index

  2. KM
    Ka Ming Nip

    Canada's Michael Smith Genome Sciences Centre, Canada

    2 publications · 111 citations

    2

    h-index

  3. WM
    Wei Miao

    Chinese Academy of Sciences, China

    2 publications · 44 citations

    2

    h-index

  4. İB
    İnanç Birol

    Canada's Michael Smith Genome Sciences Centre, Canada

    2 publications · 111 citations

    2

    h-index

  5. RL
    René L. Warren

    Canada's Michael Smith Genome Sciences Centre, Canada

    2 publications · 111 citations

    2

    h-index

1–5 of 124

Institutions

57

  1. Broad Institute

    Cambridge, United States

    2 h-index

    14 publications

    16.5K citations

  2. Chinese Academy of Sciences

    Beijing, China

    2 h-index

    21 publications

    579 citations

  3. University of British Columbia

    Vancouver, Canada

    2 h-index

    5 publications

    144 citations

  4. Canada's Michael Smith Genome Sciences Centre

    Vancouver, Canada

    2 h-index

    14 publications

    777 citations

  5. Harvard University

    Cambridge, United States

    2 h-index

    4 publications

    1.5K citations

  6. Zhengzhou University

    Zhengzhou, China

    2 h-index

    1 publications

    26 citations

  7. Institute of Hydrobiology

    Wuhan, China

    2 h-index

    16 publications

    424 citations

  8. Academy of Military Medical Sciences

    Beijing, China

    1 h-index

    8 publications

    208 citations

1–8 of 57

Venues

  1. Cell Systems

    1 publications · 228 citations

    1

    h-index

  2. Parasite

    1 publications · 13 citations

    1

    h-index

  3. Nature

    1 publications · 257 citations

    1

    h-index

  4. Nature Biotechnology

    1 publications · 1.3K citations

    1

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 11 citations

    1

    h-index

1–5