Concepedia

Single-cell Long-read Transcriptomics

Single-Cell Long-Read Transcriptomics is a molecular profiling approach that enables the comprehensive characterization of full-length transcript isoforms at individual cell resolution by combining long-read sequencing technologies with single-cell resolution methodologies.

19

Publications

2.4K

Citations

190

Authors

79

Institutions

Publications per year

2017–2026

19

Parents

Publications

19

hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data

Samuel Morabito, Fairlie Reese, Negin Rahimzadeh et al. · Cell Reports Methods · 2023 · 692 citations · Full text

, , +17

Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells

Ashley Byrne, Anna E. Beaudin, Hugh E. Olsen et al. · Nature Communications · 2017 · 421 citations · Full text

, , +17

A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain

Anoushka Joglekar, Andrey D. Prjibelski, Ahmed Mahfouz et al. · Nature Communications · 2021 · 237 citations · Full text

, , +17

Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing

Luyi Tian, Jafar S. Jabbari, Rachel Thijssen et al. · Genome biology · 2021 · 228 citations · Full text

, , +17

Identification of cell barcodes from long-read single-cell RNA-seq with BLAZE

Yupei You, Yair D. J. Prawer, Ricardo De Paoli‐Iseppi et al. · Genome biology · 2023 · 179 citations · Full text

, , +14

1–5 of 19

Authors

190

  1. AJ
    Anoushka Joglekar

    Cornell University, United States

    3 publications · 279 citations

    3

    h-index

  2. HT
    Hagen Tilgner

    Cornell University, United States

    3 publications · 279 citations

    3

    h-index

  3. NR
    Negin Rahimzadeh

    University of California, Irvine, United States

    2 publications · 735 citations

    2

    h-index

  4. CV
    Christopher Vollmers

    University of California, Santa Cruz, United States

    2 publications · 462 citations

    2

    h-index

  5. RM
    Rebecca M. DuBois

    University of California, Santa Cruz, United States

    2 publications · 462 citations

    2

    h-index

1–5 of 190

Institutions

79

  1. University of California, Santa Cruz

    Santa Cruz, United States

    3 h-index

    21 publications

    4.6K citations

  2. Cornell University

    Ithaca, United States

    3 h-index

    20 publications

    2.6K citations

  3. MIND Research Institute

    Irvine, United States

    3 h-index

    18 publications

    2.1K citations

  4. Weill Cornell Medicine

    New York, United States

    3 h-index

    18 publications

    2.1K citations

  5. Rockefeller University

    New York, United States

    2 h-index

    7 publications

    990 citations

  6. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    2 publications

    251 citations

  7. Center for Neuro-Oncology

    Boston, United States

    2 h-index

    8 publications

    168 citations

  8. New York University

    New York, United States

    2 h-index

    3 publications

    136 citations

1–8 of 79

Venues

  1. Nature Communications

    4 publications · 807 citations

    4

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 98 citations

    3

    h-index

  3. Genome biology

    2 publications · 407 citations

    2

    h-index

  4. Science Translational Medicine

    STM · 1 publications · 117 citations

    1

    h-index

  5. iScience

    1 publications · 20 citations

    1

    h-index

1–5