Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells

Ashley Byrne, Anna E. Beaudin, Hugh E. Olsen, +7

Nature Communications

Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA

Roger Volden, Theron Palmer, Ashley Byrne, +4

Proceedings of the National Academy of Sciences

EngineeringMolecular BiologyTranscriptomics TechnologyGenomicsHigh Throughput Sequencing +26

Type I interferon autoantibodies are associated with systemic immune alterations in patients with COVID-19

Monique G.P. van der Wijst, Sara E. Vazquez, George C. Hartoularos, +42

Science Translational Medicine

ImmunodeficienciesImmunologyImmunodominanceImmune SystemImmune Dysregulation +19

Puma genomes from North and South America provide insights into the genomic consequences of inbreeding

Nedda F. Saremi, Megan A. Supple, Ashley Byrne, +20

Nature Communications

Reintroduction of the archaic variant of <i>NOVA1</i> in cortical organoids alters neurodevelopment

Cleber A. Trujillo, Edward S. Rice, Nathan K. Schaefer, +23

Science

Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing

Jonathan Liu, Vanessa Tran, Venkata N. P. Vemuri, +14

Life Science Alliance

EngineeringGeneticsTranscriptomics TechnologyGenomicsSpatial Omics +21

Tracheal aspirate RNA sequencing identifies distinct immunological features of COVID-19 ARDS

Aartik Sarma, Stephanie A. Christenson, Ashley Byrne, +111

Nature Communications

Linked genetic variation and not genome structure causes widespread differential expression associated with chromosomal inversions

Iskander Said, Ashley Byrne, Victoria Serrano, +3

Proceedings of the National Academy of Sciences

Complete characterization of the human immune cell transcriptome using accurate full-length cDNA sequencing

Charles N. Cole, Ashley Byrne, Matthew S. Adams, +2

Genome Research

Horizontal transmission and recombination maintain forever young bacterial symbiont genomes

Shelbi L. Russell, Evan Pepper-Tunick, Jesper Svedberg, +5

PLoS Genetics

GeneticsMolecular BiologyEndosymbiosisMicrobial EvolutionBiological Evolution +18