Concepedia

Single-cell Data Preprocessing

Single-Cell Data Preprocessing is a computational methodology that constitutes the initial step in single-cell data analysis, distinguished by its focus on transforming raw, high-dimensional single-cell measurements into cleaned, normalized, and quality-controlled inputs suitable for downstream clustering and interpretation.

293

Publications

79.8K

Citations

1.4K

Authors

509

Institutions

Publications per year

2017–2026

251

Parents

Publications

293

Comprehensive Integration of Single-Cell Data

Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16.9K citations · Full text

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Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler, Paul Hoffman, Peter Smibert et al. · Nature Biotechnology · 2018 · 14.7K citations · Full text

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Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 10.5K citations · Full text

, , +14

Dimensionality reduction for visualizing single-cell data using UMAP

Étienne Becht, Leland McInnes, John Healy et al. · Nature Biotechnology · 2018 · 5.8K citations

, , +12

Dictionary learning for integrative, multimodal and scalable single-cell analysis

Yuhan Hao, Tim Stuart, Madeline H. Kowalski et al. · Nature Biotechnology · 2023 · 4.8K citations · Full text

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1–5 of 293

Authors

1.4K

  1. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    15 publications · 2.2K citations

    12

    h-index

  2. NY
    Nir Yosef

    University of California, Berkeley, United States

    5 publications · 444 citations

    5

    h-index

  3. LD
    Leander Dony

    Helmholtz Zentrum München, Germany

    5 publications · 162 citations

    5

    h-index

  4. MB
    Mojtaba Bahrami

    Helmholtz Zentrum München, Germany

    5 publications · 171 citations

    5

    h-index

  5. QL
    Qi Liu

    Tongji University, China

    4 publications · 97 citations

    5

    h-index

1–5 of 1.4K

Institutions

509

  1. Broad Institute

    Cambridge, United States

    16 h-index

    68 publications

    83.4K citations

  2. Harvard University

    Cambridge, United States

    14 h-index

    105 publications

    113.5K citations

  3. Technical University of Munich

    Munich, Germany

    12 h-index

    61 publications

    5.1K citations

  4. Helmholtz Zentrum München

    Munich, Germany

    12 h-index

    130 publications

    10.9K citations

  5. Wellcome Sanger Institute

    Cambridge, United Kingdom

    10 h-index

    18 publications

    8.9K citations

  6. Stanford University

    Stanford, United States

    10 h-index

    48 publications

    7.3K citations

  7. Center for Systems Biology

    Boston, United States

    9 h-index

    74 publications

    6.7K citations

  8. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    9 h-index

    17 publications

    3.3K citations

1–8 of 509

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 36 publications · 1.1K citations

    20

    h-index

  2. Bioinformatics

    19 publications · 3.5K citations

    16

    h-index

  3. PLoS Computational Biology

    15 publications · 1.3K citations

    14

    h-index

  4. Nature Biotechnology

    13 publications · 27.4K citations

    13

    h-index

  5. Nature Methods

    14 publications · 12.8K citations

    13

    h-index

1–5