Concepedia

Sequence Preprocessing

Sequence Preprocessing is a data refinement procedure that constitutes the initial computational step in omics workflows, distinguished by its specific application to raw biological sequence data to correct errors, remove low-quality regions, and standardize formats prior to downstream analysis.

81

Publications

84.3K

Citations

327

Authors

178

Institutions

Publications per year

2017–2026

24

Parents

Publications

81

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

, , +13

MEGAN analysis of metagenomic data

Daniel H. Huson, Alexander F. Auch, Ji Qi et al. · Genome Research · 2007 · 3.5K citations · Full text

, , +17

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

Ravi K. Patel, Mukesh Jain · PLoS ONE · 2012 · 3K citations · Full text

, , +14

SOAPnuke: a MapReduce acceleration-supported software for integrated quality control and preprocessing of high-throughput sequencing data

Yuxin Chen, Yongsheng Chen, Chunmei Shi et al. · GigaScience · 2017 · 2.6K citations · Full text

, , +11

Derivative Dynamic Time Warping

Eamonn Keogh, Michael J. Pazzani · 2001 · 1.1K citations

, , +10

1–5 of 81

Authors

327

  1. KS
    K. S. Pennington

    IBM Research - Thomas J. Watson Research Center, United States

    2 publications · 168 citations

    2

    h-index

  2. MC
    Ming-Chieh Chi

    National Dong Hwa University, Taiwan

    2 publications · 51 citations

    2

    h-index

  3. CY
    Chia-Hung Yeh

    National Sun Yat-sen University, Taiwan

    2 publications · 51 citations

    2

    h-index

  4. RA
    Robert A. Edwards

    San Diego State University, United States

    2 publications · 107 citations

    2

    h-index

  5. MC
    Mei‐Juan Chen

    National Dong Hwa University, Taiwan

    2 publications · 51 citations

    2

    h-index

1–5 of 327

Institutions

178

  1. University of Michigan

    Ann Arbor, United States

    2 h-index

    4 publications

    270 citations

  2. BGI Group (China)

    Shenzhen, China

    2 h-index

    13 publications

    28.4K citations

  3. University of California, Davis

    Davis, United States

    2 h-index

    4 publications

    146 citations

  4. University of Bristol

    Bristol, United Kingdom

    2 h-index

    4 publications

    1.5K citations

  5. IBM Research - Thomas J. Watson Research Center

    Yorktown Heights, United States

    2 h-index

    4 publications

    336 citations

  6. University of Washington

    Seattle, United States

    2 h-index

    6 publications

    402 citations

  7. University of Florida

    Gainesville, United States

    2 h-index

    4 publications

    216 citations

  8. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    2 publications

    258 citations

1–8 of 178

Venues

  1. BMC Bioinformatics

    6 publications · 284 citations

    6

    h-index

  2. Bioinformatics

    4 publications · 69.8K citations

    4

    h-index

  3. Genome Research

    GR · 3 publications · 3.6K citations

    3

    h-index

  4. Algorithms for Molecular Biology

    AMB · 2 publications · 43 citations

    2

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 195 citations

    2

    h-index

1–5