Concepedia

Read Coverage Analysis

Read Coverage Analysis is a computational metric in transcript sequence analysis that quantifies the depth and uniformity of sequencing reads mapped to a transcriptome, distinguishing it from related analytical methods by its specific focus on assessing completeness and reliability of transcript reconstruction through positional read density.

120

Publications

42.6K

Citations

802

Authors

327

Institutions

Publications per year

2017–2026

48

Parents

Publications

120

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

, , +17

RSeQC: quality control of RNA-seq experiments

Liguo Wang, Shengqin Wang, Wei Li · Bioinformatics · 2012 · 3K citations · Full text

, , +15

Mosdepth: quick coverage calculation for genomes and exomes

Brent S. Pedersen, Aaron R. Quinlan · Bioinformatics · 2017 · 1.3K citations · Full text

, , +14

BlobTools: Interrogation of genome assemblies

Dominik R. Laetsch, Mark Blaxter · F1000Research · 2017 · 1.1K citations · Full text

, , +17

Characterizing and measuring bias in sequence data

Michael Ross, Carsten Russ, Maura Costello et al. · Genome biology · 2013 · 964 citations · Full text

, , +17

1–5 of 120

Authors

802

  1. AK
    Anna Kostareva

    Federal Almazov North-West Medical Research Centre, Russia

    2 publications · 185 citations

    2

    h-index

  2. AK
    Artem Kiselev

    Federal Almazov North-West Medical Research Centre, Russia

    2 publications · 185 citations

    2

    h-index

  3. BL
    Binghang Liu

    BGI Group (China), China

    2 publications · 221 citations

    2

    h-index

  4. AD
    Andrey D. Prjibelski

    St Petersburg University, Russia

    2 publications · 27.3K citations

    2

    h-index

  5. IS
    Irina Shcherbakova

    St Petersburg University, Russia

    2 publications · 185 citations

    2

    h-index

1–5 of 802

Institutions

327

  1. Harvard University

    Cambridge, United States

    5 h-index

    15 publications

    1.2K citations

  2. Broad Institute

    Cambridge, United States

    5 h-index

    29 publications

    11.9K citations

  3. Lawrence Berkeley National Laboratory

    Berkeley, United States

    4 h-index

    5 publications

    645 citations

  4. University of Michigan

    Ann Arbor, United States

    4 h-index

    21 publications

    2.1K citations

  5. University of Wisconsin–Madison

    Madison, United States

    3 h-index

    12 publications

    1.6K citations

  6. The University of Melbourne

    Melbourne, Australia

    3 h-index

    14 publications

    1.1K citations

  7. University of Oxford

    Oxford, United Kingdom

    3 h-index

    6 publications

    195 citations

  8. University of California, Berkeley

    Berkeley, United States

    3 h-index

    11 publications

    539 citations

1–8 of 327

Venues

  1. Bioinformatics

    16 publications · 6.1K citations

    15

    h-index

  2. PLoS ONE

    10 publications · 1K citations

    10

    h-index

  3. BMC Bioinformatics

    10 publications · 1.2K citations

    10

    h-index

  4. BMC Genomics

    10 publications · 675 citations

    10

    h-index

  5. Nucleic Acids Research

    8 publications · 467 citations

    8

    h-index

1–5