Concepedia

Position Weight Matrix Estimation

Position Weight Matrix Estimation is a computational method in motif discovery that quantifies the likelihood of nucleotide or amino acid occurrences at each position within a regulatory motif by deriving a probabilistic model from aligned sequence instances.

66

Publications

6.1K

Citations

272

Authors

126

Institutions

Publications per year

2017–2026

12

Variants

Pwm Estimation

Parents

Publications

66

PROMO: detection of known transcription regulatory elements using species-tailored searches

Xavier Messeguer, Ruth Escudero, Domènec Farré et al. · Bioinformatics · 2002 · 1.4K citations · Full text

, , +17

RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond

Socorro Gama‐Castro, Heladia Salgado, Alberto Santos-Zavaleta et al. · Nucleic Acids Research · 2015 · 547 citations · Full text

, , +17

PrediSi: prediction of signal peptides and their cleavage positions

Karsten Hiller, Andreas Grote, Maurice Scheer et al. · Nucleic Acids Research · 2004 · 507 citations · Full text

, , +13

Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks.

Roman L. Tatusov, Stephen F. Altschul, Eugene V. Koonin · Proceedings of the National Academy of Sciences · 1994 · 287 citations

, , +16

De novo prediction of DNA-binding specificities for Cys2His2 zinc finger proteins

Anton V. Persikov, Mona Singh · Nucleic Acids Research · 2013 · 226 citations · Full text

, , +13

1–5 of 66

Authors

272

  1. GD
    Gary D. Stormo

    Washington University in St. Louis, United States

    3 publications · 319 citations

    3

    h-index

  2. BA
    Boris Adryan

    University of Cambridge, United Kingdom

    2 publications · 48 citations

    2

    h-index

  3. DA
    David A. Hendrix

    Oregon State University, United States

    2 publications · 86 citations

    2

    h-index

  4. AG
    Aaron Golden

    Ollscoil na Gaillimhe – University of Galway, Ireland

    2 publications · 86 citations

    2

    h-index

  5. CC
    Chien‐Yu Chen

    National Taiwan University, Taiwan

    2 publications · 43 citations

    2

    h-index

1–5 of 272

Institutions

126

  1. University of California, Berkeley

    Berkeley, United States

    4 h-index

    9 publications

    381 citations

  2. Inserm

    Paris, France

    3 h-index

    4 publications

    684 citations

  3. Washington University in St. Louis

    St Louis, United States

    3 h-index

    7 publications

    683 citations

  4. National Taiwan University

    Taipei, Taiwan

    2 h-index

    7 publications

    155 citations

  5. National Institutes of Health

    Bethesda, United States

    2 h-index

    8 publications

    1K citations

  6. Max Planck Institute for Molecular Genetics

    Berlin, Germany

    2 h-index

    4 publications

    252 citations

  7. National Institute of Environmental Health Sciences

    Durham, United States

    2 h-index

    8 publications

    281 citations

  8. Ollscoil na Gaillimhe – University of Galway

    Galway, Ireland

    2 h-index

    6 publications

    258 citations

1–8 of 126

Venues

  1. Nucleic Acids Research

    19 publications · 2.4K citations

    18

    h-index

  2. Bioinformatics

    8 publications · 1.8K citations

    8

    h-index

  3. PLoS ONE

    7 publications · 242 citations

    7

    h-index

  4. BMC Bioinformatics

    6 publications · 152 citations

    6

    h-index

  5. Statistical Applications in Genetics and Molecular Biology

    SAGMB · 3 publications · 217 citations

    3

    h-index

1–5