Concepedia

Pathogen Evolution Monitoring

Pathogen Evolution Monitoring is a genomic surveillance methodology that systematically tracks and analyzes genetic changes in pathogen populations over time to infer evolutionary dynamics, distinguishing itself from related approaches by its focus on the temporal and phylogenetic patterns of pathogen genetic variation.

16

Publications

4.4K

Citations

133

Authors

40

Institutions

Publications per year

2017–2026

9

Parents

Publications

16

Nextstrain: real-time tracking of pathogen evolution

James Hadfield, Colin Megill, Sidney M. Bell et al. · Bioinformatics · 2018 · 3.4K citations · Full text

, , +17

Nextstrain: real-time tracking of pathogen evolution

James Hadfield, Colin Megill, Sidney M. Bell et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2017 · 292 citations · Full text

, , +17

Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens

John Huddleston, James Hadfield, Thomas R. Sibley et al. · The Journal of Open Source Software · 2021 · 267 citations · Full text

, , +17

Meteorological factors affect the epidemiology of hemorrhagic fever with renal syndrome via altering the breeding and hantavirus-carrying states of rodents and mites: a 9 years’ longitudinal study

Fachun Jiang, Ling Wang, Shuo Wang et al. · Emerging Microbes & Infections · 2017 · 67 citations · Full text

, , +17

Genomic Content of Bordetella pertussis Clinical Isolates Circulating in Areas of Intensive Children Vaccination

Valérie Bouchez, Valérie Caro, Erwan Levillain et al. · PLoS ONE · 2008 · 61 citations · Full text

, , +14

1–5 of 16

Authors

133

  1. RA
    Richard A. Neher

    University of Basel, Switzerland

    3 publications · 4K citations

    3

    h-index

  2. JH
    James Hadfield

    Fred Hutch Cancer Center, United States

    3 publications · 4K citations

    3

    h-index

  3. TB
    Trevor Bedford

    Fred Hutch Cancer Center, United States

    3 publications · 4K citations

    3

    h-index

  4. JH
    John Huddleston

    University of Washington, United States

    3 publications · 4K citations

    3

    h-index

  5. CC
    Charlton Callender

    Institute for Health Metrics and Evaluation, United States

    2 publications · 3.7K citations

    2

    h-index

1–5 of 133

Institutions

40

  1. University of Basel

    Basel, Switzerland

    3 h-index

    4 publications

    4.3K citations

  2. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    3 h-index

    4 publications

    4.3K citations

  3. Fred Hutch Cancer Center

    Seattle, United States

    3 h-index

    22 publications

    28.2K citations

  4. University of Washington

    Seattle, United States

    3 h-index

    6 publications

    8K citations

  5. Max Planck Institute for Developmental Biology

    Tübingen, Germany

    2 h-index

    4 publications

    7.5K citations

  6. Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies

    Bari, Italy

    1 h-index

    4 publications

    160 citations

  7. Government Medical College

    Nagpur, India

    1 h-index

    1 publications

    10 citations

  8. Hospital for Tropical Diseases

    Hanoi, Vietnam

    1 h-index

    14 publications

    168 citations

1–8 of 40

Venues

  1. PLoS ONE

    2 publications · 72 citations

    2

    h-index

  2. Molecular Biology and Evolution

    MBE · 1 publications · 40 citations

    1

    h-index

  3. Journal of Phytopathology

    1 publications · 15 citations

    1

    h-index

  4. Virus Evolution

    1 publications · 25 citations

    1

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 292 citations

    1

    h-index

1–5