Concepedia

Microbial Pan-genomics

Microbial Pan-Genomics is a genomic analytical framework that characterizes the complete gene repertoire of a microbial species by distinguishing the core genome shared across all isolates from the accessory genome present in a subset of isolates, thereby capturing the species' evolutionary dynamics and functional diversity.

229

Publications

28.9K

Citations

1.3K

Authors

498

Institutions

Publications per year

2017–2026

122

Parents

Publications

229

Roary: rapid large-scale prokaryote pan genome analysis

Andrew J. Page, Carla Cummins, Martin Hunt et al. · Bioinformatics · 2015 · 5.9K citations · Full text

, , +13

Genome analysis of multiple pathogenic isolates of <i>Streptococcus agalactiae</i> : Implications for the microbial “pan-genome”

Hervé Tettelin, Vega Masignani, Michael J. Cieslewicz et al. · Proceedings of the National Academy of Sciences · 2005 · 2.7K citations · Full text

, , +15

Producing polished prokaryotic pangenomes with the Panaroo pipeline

Gerry Tonkin‐Hill, Neil MacAlasdair, Christopher Ruis et al. · Genome biology · 2020 · 1.3K citations · Full text

, , +15

BPGA- an ultra-fast pan-genome analysis pipeline

Narendrakumar M. Chaudhari, Vinod K. Gupta, Chitra Dutta · Scientific Reports · 2016 · 1K citations · Full text

, , +16

GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis

Bruno Contreras‐Moreira, Pablo Vinuesa · Applied and Environmental Microbiology · 2013 · 974 citations · Full text

, , +17

1–5 of 229

Authors

1.3K

  1. JB
    Jochen Blom

    Justus-Liebig-Universität Gießen, Germany

    9 publications · 720 citations

    9

    h-index

  2. VA
    Vasco Azevedo

    Universidade Federal de Minas Gerais, Brazil

    8 publications · 563 citations

    8

    h-index

  3. DW
    David W. Ussery

    Technical University of Denmark, Denmark

    8 publications · 680 citations

    8

    h-index

  4. JC
    Jukka Corander

    University of Helsinki, Finland

    7 publications · 1.7K citations

    7

    h-index

  5. AS
    Artur Silva

    Universidade Federal do Pará, Brazil

    7 publications · 525 citations

    7

    h-index

1–5 of 1.3K

Institutions

498

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    12 h-index

    50 publications

    51.9K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    12 h-index

    49 publications

    3.7K citations

  3. University of Oxford

    Oxford, United Kingdom

    9 h-index

    25 publications

    2K citations

  4. Universidade Federal de Minas Gerais

    Belo Horizonte, Brazil

    9 h-index

    73 publications

    5.2K citations

  5. Technical University of Denmark

    Kongens Lyngby, Denmark

    9 h-index

    26 publications

    2.4K citations

  6. University of Chinese Academy of Sciences

    Beijing, China

    8 h-index

    29 publications

    5.6K citations

  7. University of Oslo

    Oslo, Norway

    8 h-index

    16 publications

    4.6K citations

  8. Bielefeld University

    Bielefeld, Germany

    7 h-index

    29 publications

    3.1K citations

1–8 of 498

Venues

  1. BMC Genomics

    33 publications · 2.4K citations

    27

    h-index

  2. Frontiers in Microbiology

    20 publications · 1.4K citations

    17

    h-index

  3. Scientific Reports

    13 publications · 1.7K citations

    13

    h-index

  4. PLoS ONE

    12 publications · 937 citations

    11

    h-index

  5. Bioinformatics

    10 publications · 7.2K citations

    10

    h-index

1–5