Concepedia

Long-range Sequence Contacts

Long-Range Sequence Contacts is a computational biology construct that identifies pairwise interactions between amino acid residues separated by large sequence distances, typically used to infer structural or functional constraints in protein sequences.

142

Publications

16.4K

Citations

513

Authors

257

Institutions

Publications per year

2017–2026

38

Parents

Publications

142

Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Neva C. Durand, Muhammad S. Shamim, Ido Machol et al. · Cell Systems · 2016 · 4.3K citations · Full text

, , +15

Long-range correlations in nucleotide sequences

Chung‐Kang Peng, Sergey V. Buldyrev, Ary L. Goldberger et al. · Nature · 1992 · 1.4K citations

, , +13

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

Borbála Mifsud, Filipe Tavares-Cadete, Alice Young et al. · Nature Genetics · 2015 · 1.1K citations

, , +16

Medium- and Long-Range Interaction Parameters between Amino Acids for Predicting Three-Dimensional Structures of Proteins

Seiji Tanaka, Harold A. Scheraga · Macromolecules · 1976 · 442 citations

, , +16

Capturing non-local interactions by long short-term memory bidirectional recurrent neural networks for improving prediction of protein secondary structure, backbone angles, contact numbers and solvent accessibility

Rhys Heffernan, Yuedong Yang, Kuldip K. Paliwal et al. · Bioinformatics · 2017 · 390 citations · Full text

, , +13

1–5 of 142

Authors

513

  1. MM
    M. Michael Gromiha

    Indian Institute of Technology Madras, India

    4 publications · 91 citations

    4

    h-index

  2. IS
    István Simon

    Institute of Molecular Life Sciences, Hungary

    3 publications · 143 citations

    3

    h-index

  3. AK
    Andriy Kryshtafovych

    University of California, Davis, United States

    3 publications · 144 citations

    3

    h-index

  4. KF
    Krzysztof Fidelis

    University of California, Davis, United States

    3 publications · 144 citations

    3

    h-index

  5. DT
    David T. Jones

    University College London, United Kingdom

    3 publications · 467 citations

    3

    h-index

1–5 of 513

Institutions

257

  1. Centre National de la Recherche Scientifique

    Paris, France

    13 h-index

    63 publications

    4K citations

  2. Sorbonne Université

    Paris, France

    6 h-index

    18 publications

    525 citations

  3. University College London

    London, United Kingdom

    5 h-index

    12 publications

    3.9K citations

  4. Inserm

    Paris, France

    5 h-index

    5 publications

    754 citations

  5. Stanford University

    Stanford, United States

    4 h-index

    8 publications

    4.4K citations

  6. Stockholm University

    Stockholm, Sweden

    4 h-index

    11 publications

    580 citations

  7. National Institutes of Health

    Bethesda, United States

    4 h-index

    5 publications

    1.6K citations

  8. National Institute of Advanced Industrial Science and Technology

    Tsukuba, Japan

    3 h-index

    3 publications

    104 citations

1–8 of 257

Venues

  1. Bioinformatics

    15 publications · 1.6K citations

    15

    h-index

  2. Proteins Structure Function and Bioinformatics

    9 publications · 362 citations

    9

    h-index

  3. BMC Bioinformatics

    7 publications · 300 citations

    7

    h-index

  4. Proceedings of the National Academy of Sciences

    PNAS · 6 publications · 669 citations

    6

    h-index

  5. Journal of Molecular Biology

    JMB · 6 publications · 719 citations

    6

    h-index

1–5