Muhammad S. Shamim

Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Neva C. Durand, Muhammad S. Shamim, Ido Machol et al. · Cell Systems · 2016 · 4.3K citations · Full text

Medicine, Bioinformatics, Visualization +15

De novo assembly of the <i>Aedes aegypti</i> genome using Hi-C yields chromosome-length scaffolds

Olga Dudchenko, Sanjit Singh Batra, Arina D. Omer et al. · Science · 2017 · 3K citations · Full text

Life Sciences, Entomology, Genetics +16

Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom

Neva C. Durand, James Robinson, Muhammad S. Shamim et al. · Cell Systems · 2016 · 2.6K citations · Full text

Computing, Bioinformatics, Visualization +17

Cohesin Loss Eliminates All Loop Domains

Suhas S.P. Rao, Su-Chen Huang, Brian Glenn St Hilaire et al. · Cell · 2017 · 2.1K citations · Full text

Life Sciences, Cell Biology, Molecular Biology +4

The Energetics and Physiological Impact of Cohesin Extrusion

Laura Vian, Aleksandra Pękowska, Suhas S.P. Rao et al. · Cell · 2018 · 633 citations · Full text

Medicine, Genetics, Molecular Biology +15