Rhys Heffernan

Capturing non-local interactions by long short-term memory bidirectional recurrent neural networks for improving prediction of protein secondary structure, backbone angles, contact numbers and solvent accessibility

Rhys Heffernan, Yuedong Yang, Kuldip K. Paliwal et al. · Bioinformatics · 2017 · 390 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +13

Improving prediction of secondary structure, local backbone angles and solvent accessible surface area of proteins by iterative deep learning

Rhys Heffernan, Kuldip K. Paliwal, James Lyons et al. · Scientific Reports · 2015 · 365 citations · Full text

Life Sciences, Bioinformatics, Biophysics +13

Sixty-five years of the long march in protein secondary structure prediction: the final stretch?

Yuedong Yang, Jianzhao Gao, Jihua Wang et al. · Briefings in Bioinformatics · 2016 · 259 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +12

Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳s general PseAAC

Abdollah Dehzangi, Rhys Heffernan, Alok Sharma et al. · Journal of Theoretical Biology · 2014 · 243 citations · Full text

Life Sciences, Biochemistry, Proteomics +11

SPIDER2: A Package to Predict Secondary Structure, Accessible Surface Area, and Main-Chain Torsional Angles by Deep Neural Networks

Yuedong Yang, Rhys Heffernan, Kuldip K. Paliwal et al. · Methods in molecular biology · 2016 · 177 citations

Life Sciences, Bioinformatics, Computer Science +14