Concepedia

Kernel-based Network Inference

Kernel-Based Network Inference is a computational method within regulatory network inference that employs kernel functions to model nonlinear dependencies among biological entities, distinguishing itself by leveraging reproducing kernel Hilbert spaces to infer regulatory interactions from high-dimensional genomics data.

24

Publications

1.1K

Citations

76

Authors

48

Institutions

Publications per year

2017–2026

8

Parents

Publications

24

Protein network inference from multiple genomic data: a supervised approach

Yoshihiro Yamanishi, Jean‐Philippe Vert, Minoru Kanehisa · Bioinformatics · 2004 · 226 citations

, , +15

Network inference with Granger causality ensembles on single-cell transcriptomics

Atul Deshpande, Li‐Fang Chu, Ron Stewart et al. · Cell Reports · 2022 · 125 citations · Full text

, , +16

Learning kernels from biological networks by maximizing entropy

Koji Tsuda, William Stafford Noble · Bioinformatics · 2004 · 113 citations

, , +15

Finding friends and enemies in an enemies-only network: A graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions

Yan Qi, Yasir Suhail, Yu-Yi Lin et al. · Genome Research · 2008 · 98 citations · Full text

, , +16

Selective integration of multiple biological data for supervised network inference

Tsuyoshi Kato, Koji Tsuda, Kiyoshi Asai · Computer applications in the biosciences · 2005 · 74 citations

, , +14

1–5 of 24

Authors

76

  1. FD
    Florence d’Alché–Buc

    Informatique, BioInformatique, Systèmes Complexes, France

    3 publications · 120 citations

    3

    h-index

  2. KT
    Koji Tsuda

    The University of Tokyo, Japan

    2 publications · 187 citations

    2

    h-index

  3. PG
    Pierre Geurts

    University of Liège, Belgium

    2 publications · 81 citations

    2

    h-index

  4. JV
    Jean‐Philippe Vert

    École Nationale Supérieure des Mines de Paris, France

    2 publications · 241 citations

    2

    h-index

  5. EN
    Eugene Novikov

    Institut Curie, France

    1 publications · 17 citations

    1

    h-index

1–5 of 76

Institutions

48

  1. Institut Curie

    Paris, France

    3 h-index

    6 publications

    138 citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    3 h-index

    9 publications

    275 citations

  3. Informatique, BioInformatique, Systèmes Complexes

    Évry-Courcouronnes, France

    3 h-index

    7 publications

    277 citations

  4. École Nationale Supérieure des Mines de Paris

    Paris, France

    2 h-index

    3 publications

    256 citations

  5. Max Planck Institute for Biological Cybernetics

    Tübingen, Germany

    2 h-index

    3 publications

    135 citations

  6. Max Planck Society

    Munich, Germany

    2 h-index

    3 publications

    135 citations

  7. University of Liège

    Liège, Belgium

    2 h-index

    3 publications

    125 citations

  8. Carnegie Mellon University

    Pittsburgh, United States

    1 h-index

    2 publications

    34 citations

1–8 of 48

Venues

  1. Bioinformatics

    3 publications · 355 citations

    3

    h-index

  2. BMC Bioinformatics

    3 publications · 112 citations

    3

    h-index

  3. 1

    h-index

  4. Mathematics

    1 publications · 23 citations

    1

    h-index

  5. BMC Systems Biology

    1 publications · 17 citations

    1

    h-index

1–5